| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51894304
Identifier: 51894304
GI number: 51894304
Start: 3376517
End: 3376924
Strand: Reverse
Name: 51894304
Synonym: STH3169
Alternate gene names: NA
Gene position: 3376924-3376517 (Counterclockwise)
Preceding gene: 51894305
Following gene: 51894303
Centisome position: 94.69
GC content: 69.12
Gene sequence:
>408_bases ATGAAGACCGAACCAACCGTCTACAGCTACGACGACCTGGAGCGTGCGGGGCGCGACCTCTGGGACGGGGTGCGCAACGC GGCGGCGGCCAGGAATATGCGGGCGATGAGGCCCGGCGACCTGTTCCTCTTCTACCACACCGGCGACGAACGGGCGGTTG TGGGCGTCGGGCGCATCGTCAGCGAGCCGTACCCCGACCCGACCGATTCGGAGGGCCGATGGGTCGCGGTGGATGTCGAG CCGCTCTACCGGTTCAGAACCCCGGTGACCCTGGCCGATGTTAAGGCCGATCCCCGGTTCGCCGACTGGGCCCTGGTGCG CCAGTCGCGCCTGTCGGTCATGCCGGTGAGTCAGGAGCAGTGGGCCTGGCTGCACGAGATGGGCGGGACCGAGCTCCGGG AGGCGTGA
Upstream 100 bases:
>100_bases GGGTCGGCGGGCGCCACGGCCGGATCATCCGGCGGGGCGAGGAGTGAGGGCCGGCGCTCCGGCCCGCGGAGAGGAGGACC TGGCGATGGCCTTCTGGTTG
Downstream 100 bases:
>100_bases GCCGGGGGGGCGTGAGCCAGGGCGTGCGGCCCCCGTTCGGCCCTGGGAGATGGCGTGATTACGGGCGAGACGTCAGGAGA GGGGTGTCCCTCTCCTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIVSEPYPDPTDSEGRWVAVDVE PLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQWAWLHEMGGTELREA
Sequences:
>Translated_135_residues MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIVSEPYPDPTDSEGRWVAVDVE PLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQWAWLHEMGGTELREA >Mature_135_residues MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIVSEPYPDPTDSEGRWVAVDVE PLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQWAWLHEMGGTELREA
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15413; Mature: 15413
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIV CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECHHH SEPYPDPTDSEGRWVAVDVEPLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQ CCCCCCCCCCCCCEEEEECHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEECCCCHHH WAWLHEMGGTELREA HHHHHHCCCCCCCCC >Mature Secondary Structure MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIV CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECHHH SEPYPDPTDSEGRWVAVDVEPLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQ CCCCCCCCCCCCCEEEEECHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEECCCCHHH WAWLHEMGGTELREA HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA