Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894304

Identifier: 51894304

GI number: 51894304

Start: 3376517

End: 3376924

Strand: Reverse

Name: 51894304

Synonym: STH3169

Alternate gene names: NA

Gene position: 3376924-3376517 (Counterclockwise)

Preceding gene: 51894305

Following gene: 51894303

Centisome position: 94.69

GC content: 69.12

Gene sequence:

>408_bases
ATGAAGACCGAACCAACCGTCTACAGCTACGACGACCTGGAGCGTGCGGGGCGCGACCTCTGGGACGGGGTGCGCAACGC
GGCGGCGGCCAGGAATATGCGGGCGATGAGGCCCGGCGACCTGTTCCTCTTCTACCACACCGGCGACGAACGGGCGGTTG
TGGGCGTCGGGCGCATCGTCAGCGAGCCGTACCCCGACCCGACCGATTCGGAGGGCCGATGGGTCGCGGTGGATGTCGAG
CCGCTCTACCGGTTCAGAACCCCGGTGACCCTGGCCGATGTTAAGGCCGATCCCCGGTTCGCCGACTGGGCCCTGGTGCG
CCAGTCGCGCCTGTCGGTCATGCCGGTGAGTCAGGAGCAGTGGGCCTGGCTGCACGAGATGGGCGGGACCGAGCTCCGGG
AGGCGTGA

Upstream 100 bases:

>100_bases
GGGTCGGCGGGCGCCACGGCCGGATCATCCGGCGGGGCGAGGAGTGAGGGCCGGCGCTCCGGCCCGCGGAGAGGAGGACC
TGGCGATGGCCTTCTGGTTG

Downstream 100 bases:

>100_bases
GCCGGGGGGGCGTGAGCCAGGGCGTGCGGCCCCCGTTCGGCCCTGGGAGATGGCGTGATTACGGGCGAGACGTCAGGAGA
GGGGTGTCCCTCTCCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIVSEPYPDPTDSEGRWVAVDVE
PLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQWAWLHEMGGTELREA

Sequences:

>Translated_135_residues
MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIVSEPYPDPTDSEGRWVAVDVE
PLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQWAWLHEMGGTELREA
>Mature_135_residues
MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIVSEPYPDPTDSEGRWVAVDVE
PLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQWAWLHEMGGTELREA

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15413; Mature: 15413

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIV
CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECHHH
SEPYPDPTDSEGRWVAVDVEPLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQ
CCCCCCCCCCCCCEEEEECHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEECCCCHHH
WAWLHEMGGTELREA
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MKTEPTVYSYDDLERAGRDLWDGVRNAAAARNMRAMRPGDLFLFYHTGDERAVVGVGRIV
CCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECHHH
SEPYPDPTDSEGRWVAVDVEPLYRFRTPVTLADVKADPRFADWALVRQSRLSVMPVSQEQ
CCCCCCCCCCCCCEEEEECHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCEECCCCHHH
WAWLHEMGGTELREA
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA