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The map label for this gene is petB [H]

Identifier: 51894283

GI number: 51894283

Start: 3347214

End: 3347990

Strand: Reverse

Name: petB [H]

Synonym: STH3148

Alternate gene names: 51894283

Gene position: 3347990-3347214 (Counterclockwise)

Preceding gene: 51894284

Following gene: 51894282

Centisome position: 93.88

GC content: 64.22

Gene sequence:

>777_bases
GTGGGTCTGTGGGCGAGGTTCAAGAATACGACGCTCTACAAGTCCATCTACCGCAATGAATACCCGGACACCCCGCGCAA
TCAGGTCCTGGTCATCCTGAACAGCGTTGTGCTCCACCTGCACCCGGTCAAGGTGCCTCGGCGCGCCGTGCGGATGAGCT
ACACCTGGGGCCTCGGCGGGCTGTCATTGCTCATGTTCCTCATGCTGACGGTGACGGGCGTCTGGCTCATGTTCTACTAC
GTGCCGTCCGTACCCGGCGCCTACGAGTCGATGAAGGCCCTGGAGACGGACGTCATCTTCGGGCCGTTCGCCCGCAATCT
TCACCGGTGGGCGGCCCACGGCATGGTGATCGCCGTGTGGCTGCACATGACGCGGGTCTTCTACACCGGTTCGTACAAGC
CGCCCCGGGAGTTCAACTGGGTGATCGGCGTCGCACTCTTCCTGATCACGGTCCTTCTCTCCTTCACGGGCTACCTGTTG
CCCTGGGACCAGCTGGCGTACTGGGCCATTCAGGTCGGTTCCAACATGGCCAAGGTGACTCCGGTCATCGGCACCTACGT
CCAGCGGGCGCTGCTGGACGGCTATGACATCGGCCCGGCCACGCTGGTGCGCTGGTACACCCTGCACGTGATCCTGCTGC
CGCTCGCCTGCATTGCGCTGATGGCCGTGCACTTCTGGCGCATCCGCAAGGACGGCGGCATCTCGACCCCGATTCCGTAC
GACGAGGACGAGGTCGAGGGCGCGGTCGAGGCCGGTCTGGCCGCCGACGATCTGTAG

Upstream 100 bases:

>100_bases
GCCTGCAAAGCCGAATTGCGGCTATAATGTATGCTGTTGCGCAGTGTGGCTGGCTGGATTCCGGGTTGCTGGGTTCCGAC
ATTGGGGAGGTGCTGGTTCT

Downstream 100 bases:

>100_bases
GGAGGGAGCTCGCATGGCTGAGGCGCACGAGAAGTATCAGCAGACGGGCCCCAAGGTGAAGCCCCGTCAGAAGGAGGAGC
TGGTCTACACCTGGCCCTTC

Product: menaquinol-cytochrome C reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGLWARFKNTTLYKSIYRNEYPDTPRNQVLVILNSVVLHLHPVKVPRRAVRMSYTWGLGGLSLLMFLMLTVTGVWLMFYY
VPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVWLHMTRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLL
PWDQLAYWAIQVGSNMAKVTPVIGTYVQRALLDGYDIGPATLVRWYTLHVILLPLACIALMAVHFWRIRKDGGISTPIPY
DEDEVEGAVEAGLAADDL

Sequences:

>Translated_258_residues
MGLWARFKNTTLYKSIYRNEYPDTPRNQVLVILNSVVLHLHPVKVPRRAVRMSYTWGLGGLSLLMFLMLTVTGVWLMFYY
VPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVWLHMTRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLL
PWDQLAYWAIQVGSNMAKVTPVIGTYVQRALLDGYDIGPATLVRWYTLHVILLPLACIALMAVHFWRIRKDGGISTPIPY
DEDEVEGAVEAGLAADDL
>Mature_257_residues
GLWARFKNTTLYKSIYRNEYPDTPRNQVLVILNSVVLHLHPVKVPRRAVRMSYTWGLGGLSLLMFLMLTVTGVWLMFYYV
PSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVWLHMTRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLLP
WDQLAYWAIQVGSNMAKVTPVIGTYVQRALLDGYDIGPATLVRWYTLHVILLPLACIALMAVHFWRIRKDGGISTPIPYD
EDEVEGAVEAGLAADDL

Specific function: Component of the cytochrome bc complex which donates electrons to the photosynthetic reaction center [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family. PetB subfamily [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=178, Percent_Identity=32.5842696629214, Blast_Score=98, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6226532, Length=177, Percent_Identity=28.8135593220339, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6226529, Length=188, Percent_Identity=28.1914893617021, Blast_Score=86, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6226531, Length=146, Percent_Identity=28.7671232876712, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6226530, Length=133, Percent_Identity=30.0751879699248, Blast_Score=70, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 29271; Mature: 29140

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GLWARFKNTTLYKSIYRNEYPDTPRNQVLVILNSVVLHLHPVKVPRRAVRMSYTWGLGG
CCCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
LSLLMFLMLTVTGVWLMFYYVPSVPGAYESMKALETDVIFGPFARNLHRWAAHGMVIAVW
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHH
LHMTRVFYTGSYKPPREFNWVIGVALFLITVLLSFTGYLLPWDQLAYWAIQVGSNMAKVT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHH
PVIGTYVQRALLDGYDIGPATLVRWYTLHVILLPLACIALMAVHFWRIRKDGGISTPIPY
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DEDEVEGAVEAGLAADDL
CHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9843979 [H]