| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894282
Identifier: 51894282
GI number: 51894282
Start: 3346439
End: 3347200
Strand: Reverse
Name: 51894282
Synonym: STH3147
Alternate gene names: NA
Gene position: 3347200-3346439 (Counterclockwise)
Preceding gene: 51894283
Following gene: 51894281
Centisome position: 93.86
GC content: 65.09
Gene sequence:
>762_bases ATGGCTGAGGCGCACGAGAAGTATCAGCAGACGGGCCCCAAGGTGAAGCCCCGTCAGAAGGAGGAGCTGGTCTACACCTG GCCCTTCCTCGTTTCCATCGAGGCGATCATGGCCATCACCGCGATCCTTGCCTTTGCGCTGATGGCCACGTTCATCGACG CGCCGCTGCTGGACCTGGCCAATCCCGACAAGACCCCCAACCCGGCCAAGGCGCCGTGGTACTTCCTGGGGCTTCAGGAG CTGCTGCTGCACATGGACCCCGCGCTGGCGGGCGTGATCGTGCCCGGCGCCTGTCTGGTGCTGCTGGCCACGATCCCGTA CATCGACCGCGACCGGCGCGGCACCGGCATCTGGTTCTCCACGAAGAAGGGGCTTCCCATCACCGTCTTCTCCGCCATCT ACACCGCGGTGATCGAGATCGCCCTCGTACTGGTGGACGAGGTGGTGCGGGTGCCCGGCATGCCCGAGGGCTCCTACCGC ATCTCTGCCACCGTCACCTACCTGCTGGAGCAGACCGGGCTGCCCACCTCCGCCGTCTCCTGGGTCGGATCGATCTTCAT CCCGCTCGTGCTGATGATCGGCATCCCCTGGGTACTGGCCGTGATCGTCAGGCGCCGGTGGCAGGCCAACACCCGTGAGG TCATGATTGCGCTGTACACGTTCTTCTTCACCTCGTTCATCGTACTCTCCGGTATCGGCACCTTCTTCCGGGGCGAGTCG ATGCACCTGGTGTGGCCGTGGGAGCTGCAGCCCCCGCACTAG
Upstream 100 bases:
>100_bases GACGGCGGCATCTCGACCCCGATTCCGTACGACGAGGACGAGGTCGAGGGCGCGGTCGAGGCCGGTCTGGCCGCCGACGA TCTGTAGGGAGGGAGCTCGC
Downstream 100 bases:
>100_bases GCCGGCATCGCCGCCGACTGACATACCTCTGGGAAAGGGTGAGACTCCATGGCCGCTGAAAATCAGGTCCACGCTGCTGC GGCGGCGGTTCCGCCCGCCC
Product: putative menaquinol-cytochrome C reductase
Products: NA
Alternate protein names: Cytochrome B/B6 Domain-Containing Protein
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MAEAHEKYQQTGPKVKPRQKEELVYTWPFLVSIEAIMAITAILAFALMATFIDAPLLDLANPDKTPNPAKAPWYFLGLQE LLLHMDPALAGVIVPGACLVLLATIPYIDRDRRGTGIWFSTKKGLPITVFSAIYTAVIEIALVLVDEVVRVPGMPEGSYR ISATVTYLLEQTGLPTSAVSWVGSIFIPLVLMIGIPWVLAVIVRRRWQANTREVMIALYTFFFTSFIVLSGIGTFFRGES MHLVWPWELQPPH
Sequences:
>Translated_253_residues MAEAHEKYQQTGPKVKPRQKEELVYTWPFLVSIEAIMAITAILAFALMATFIDAPLLDLANPDKTPNPAKAPWYFLGLQE LLLHMDPALAGVIVPGACLVLLATIPYIDRDRRGTGIWFSTKKGLPITVFSAIYTAVIEIALVLVDEVVRVPGMPEGSYR ISATVTYLLEQTGLPTSAVSWVGSIFIPLVLMIGIPWVLAVIVRRRWQANTREVMIALYTFFFTSFIVLSGIGTFFRGES MHLVWPWELQPPH >Mature_252_residues AEAHEKYQQTGPKVKPRQKEELVYTWPFLVSIEAIMAITAILAFALMATFIDAPLLDLANPDKTPNPAKAPWYFLGLQEL LLHMDPALAGVIVPGACLVLLATIPYIDRDRRGTGIWFSTKKGLPITVFSAIYTAVIEIALVLVDEVVRVPGMPEGSYRI SATVTYLLEQTGLPTSAVSWVGSIFIPLVLMIGIPWVLAVIVRRRWQANTREVMIALYTFFFTSFIVLSGIGTFFRGESM HLVWPWELQPPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28228; Mature: 28097
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS51003 CYTB_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAHEKYQQTGPKVKPRQKEELVYTWPFLVSIEAIMAITAILAFALMATFIDAPLLDLA CCCHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC NPDKTPNPAKAPWYFLGLQELLLHMDPALAGVIVPGACLVLLATIPYIDRDRRGTGIWFS CCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE TKKGLPITVFSAIYTAVIEIALVLVDEVVRVPGMPEGSYRISATVTYLLEQTGLPTSAVS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCHHHHH WVGSIFIPLVLMIGIPWVLAVIVRRRWQANTREVMIALYTFFFTSFIVLSGIGTFFRGES HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MHLVWPWELQPPH EEEEEECCCCCCC >Mature Secondary Structure AEAHEKYQQTGPKVKPRQKEELVYTWPFLVSIEAIMAITAILAFALMATFIDAPLLDLA CCHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC NPDKTPNPAKAPWYFLGLQELLLHMDPALAGVIVPGACLVLLATIPYIDRDRRGTGIWFS CCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE TKKGLPITVFSAIYTAVIEIALVLVDEVVRVPGMPEGSYRISATVTYLLEQTGLPTSAVS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCHHHHH WVGSIFIPLVLMIGIPWVLAVIVRRRWQANTREVMIALYTFFFTSFIVLSGIGTFFRGES HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MHLVWPWELQPPH EEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA