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The map label for this gene is ctsR [H]

Identifier: 51894271

GI number: 51894271

Start: 3337321

End: 3337776

Strand: Reverse

Name: ctsR [H]

Synonym: STH3136

Alternate gene names: 51894271

Gene position: 3337776-3337321 (Counterclockwise)

Preceding gene: 51894272

Following gene: 51894270

Centisome position: 93.6

GC content: 66.23

Gene sequence:

>456_bases
ATGGCCAACCTGGCGGACAAGATCGAACGCTACCTGAAGGAGCACCTGAGCAGGACGGAGATCCTGGAGGTGCGGCGCGC
CATGCTGGCCGCCCTGTTTGACTGCGCGCCCTCGCAGATCAACTACGTGCTGACCACCCGCTTCACCCCCGAGCGCGGCT
ACCTGGTGGAAAGCCGGCGCGGGGGCGGGGGGTATATCCGCATCATCCGACTCAACATCAAAAACCCCGAGGACCTGCAG
GACCTGATCGAGCGGCAGATCGGCGACGCGATCAGCCAGAACGAGGCGTTTCACATCGTCGGGCGGCTGCGGGACGAGGG
GCTCATCGACGAGCGCGAAGCGGCCATCATGGAGGCGGCCGTGCGGCGCGAGGTCCTGGGGCTGGAGCTGCCGTACCGGG
ATGAGGTGCGGGCCAGCGTGCTGAAGGCGATGCTCACCGCTATTCTGCGCTTCTGA

Upstream 100 bases:

>100_bases
GAGGCGCATATTTCGTTACGAGTTGCACTTGCCCGGCAGCCCGTCGGGGGGTATTATTGGAAGGCAGGAAGGTCAAACAA
GGTCAGGGGGTGAGCGCCTG

Downstream 100 bases:

>100_bases
GGAGGTCTTGGCCCATGCGGTGCGAGCGATGCGGCCAGCGTGAGGCGACGGTGCACCAGACGGTGATCACCAACGGCCAG
AAGCAGGAGTCGCACCTGTG

Product: transcriptional repressor of class III stress genes

Products: NA

Alternate protein names: Class three stress gene repressor [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MANLADKIERYLKEHLSRTEILEVRRAMLAALFDCAPSQINYVLTTRFTPERGYLVESRRGGGGYIRIIRLNIKNPEDLQ
DLIERQIGDAISQNEAFHIVGRLRDEGLIDEREAAIMEAAVRREVLGLELPYRDEVRASVLKAMLTAILRF

Sequences:

>Translated_151_residues
MANLADKIERYLKEHLSRTEILEVRRAMLAALFDCAPSQINYVLTTRFTPERGYLVESRRGGGGYIRIIRLNIKNPEDLQ
DLIERQIGDAISQNEAFHIVGRLRDEGLIDEREAAIMEAAVRREVLGLELPYRDEVRASVLKAMLTAILRF
>Mature_150_residues
ANLADKIERYLKEHLSRTEILEVRRAMLAALFDCAPSQINYVLTTRFTPERGYLVESRRGGGGYIRIIRLNIKNPEDLQD
LIERQIGDAISQNEAFHIVGRLRDEGLIDEREAAIMEAAVRREVLGLELPYRDEVRASVLKAMLTAILRF

Specific function: Controls the expression of the cellular protein quality control genes clpC, clpE and clpP. Acts as a repressor of these class III stress genes by binding to a directly repeated heptanucleotide operator sequence (A/GGTCAAA NAN A/GGTCAAA). After heat shock,

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008463 [H]

Pfam domain/function: PF05848 CtsR [H]

EC number: NA

Molecular weight: Translated: 17311; Mature: 17180

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLADKIERYLKEHLSRTEILEVRRAMLAALFDCAPSQINYVLTTRFTPERGYLVESRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCC
GGGGYIRIIRLNIKNPEDLQDLIERQIGDAISQNEAFHIVGRLRDEGLIDEREAAIMEAA
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
VRREVLGLELPYRDEVRASVLKAMLTAILRF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANLADKIERYLKEHLSRTEILEVRRAMLAALFDCAPSQINYVLTTRFTPERGYLVESRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCC
GGGGYIRIIRLNIKNPEDLQDLIERQIGDAISQNEAFHIVGRLRDEGLIDEREAAIMEAA
CCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
VRREVLGLELPYRDEVRASVLKAMLTAILRF
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]