| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894265
Identifier: 51894265
GI number: 51894265
Start: 3330437
End: 3330676
Strand: Reverse
Name: 51894265
Synonym: STH3130
Alternate gene names: NA
Gene position: 3330676-3330437 (Counterclockwise)
Preceding gene: 51894266
Following gene: 51894264
Centisome position: 93.4
GC content: 70.42
Gene sequence:
>240_bases TTGCCGAGGGGGCGTGATGGGATGGACTACGGCGTGGCGCTCTTCCACACGACATCGATGGCCTTGAAGGCTGAGCAACG GCTGAAGGCGGCGGGGCTGGCCGTCAAGCTCATCCCGACGCCCCGGCAGTTCTCCAGCGACTGCGGGTTCGCGCTGCGCT TCGCCTGGGCGGACTGCGCACGGGTGGAGGAGCTGCTGCGCACCGGCGGGGTGGAGACCGCCGGGCTGCGCCGGTTGTAG
Upstream 100 bases:
>100_bases CGGACCCTGGGCACGTTCCCGCAGGGGACGGTGCGGCTGTCCCCGGGGCCTTTCAACACCCCGGAGCAGATCGCGCGGGC GGTGGCGGCGGTCCGCCGGC
Downstream 100 bases:
>100_bases CCTGCGGCCACGGCGGTTCCGTTTTCGGACAAGCCGGAGTTTCCTCTTGACGGACGTACGGGCAACGGCTAGAATGAGCG TCAAATACGAAACGGCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPRGRDGMDYGVALFHTTSMALKAEQRLKAAGLAVKLIPTPRQFSSDCGFALRFAWADCARVEELLRTGGVETAGLRRL
Sequences:
>Translated_79_residues MPRGRDGMDYGVALFHTTSMALKAEQRLKAAGLAVKLIPTPRQFSSDCGFALRFAWADCARVEELLRTGGVETAGLRRL >Mature_78_residues PRGRDGMDYGVALFHTTSMALKAEQRLKAAGLAVKLIPTPRQFSSDCGFALRFAWADCARVEELLRTGGVETAGLRRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8654; Mature: 8523
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGRDGMDYGVALFHTTSMALKAEQRLKAAGLAVKLIPTPRQFSSDCGFALRFAWADCA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEHHHHHHHH RVEELLRTGGVETAGLRRL HHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PRGRDGMDYGVALFHTTSMALKAEQRLKAAGLAVKLIPTPRQFSSDCGFALRFAWADCA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEHHHHHHHH RVEELLRTGGVETAGLRRL HHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA