| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is adk
Identifier: 51894189
GI number: 51894189
Start: 3264076
End: 3264726
Strand: Reverse
Name: adk
Synonym: STH3054
Alternate gene names: 51894189
Gene position: 3264726-3264076 (Counterclockwise)
Preceding gene: 51894190
Following gene: 51894188
Centisome position: 91.55
GC content: 66.82
Gene sequence:
>651_bases ATGCACATCATTCTGATGGGCCCGCCGGGAGCAGGCAAGGGAACCCAGGCCGTGCTGCTGGCCGGGCAGGAAGGCATTCC ACACATCTCCACCGGGGACATCTTCCGTGCCCACATGAGCCAGGGCACTCCCCTGGGCAAGCTGGCCAAGGAGTACGTGG ATGCTGGCAAGTATGTACCGGATGACGTGACCAACGCCATGGTCAGGGACCGGCTTGCACAGCCCGACTGCAAGAAGGGG TTCGTCCTGGACGGATACCCGCGGACGCCGGAGCAGGCCCGGGCGCTGGACGAGATGCTGGCTGAGCTGGGCCTCGCGTT GGACGCCGTCATCAACATCGACGTGCCGGACGAACTGCTGGTCGAGCGTGCGGTGGGCCGCCGGGTGTGCCGCTCCTGTG GGGCCACCTATCACGTCCGGTTCAACCCGCCCCGCGAGGCCGGCCGCTGTGACCGGTGCGGCGGCGAGCTGTACCAGCGC AGCGACGACCAGGAAGAGAAGGTTGCGGTGCGCCTCAACCTGTACCATTCCCAGACGGCGCCGCTTCTCCAGTTCTATAA GGAACGCGGGCTGGTTCGCACCGTCCGCGGAGACCAGCCCATGGACCAGGTCACGGCCGACATCAAGGAGGCCGTGCGGG CTTCCCGCTGA
Upstream 100 bases:
>100_bases CGAGGGTGCGCAGAGGACCGGACCGTCCTCCCCGTCCGGAGGACGCCGGTCCTCGCGGGTCCCGTCTGCGCGCCCGGTTT GGTGAAAGCGAGGTAGGGGG
Downstream 100 bases:
>100_bases GGCCGCATCGGCCGCGCTTGCAAACGTGGCAGTGCGGTGCTATCCTGGCTATCGGCTGGGAAATCCGGGAAGCGCTGCGC ACAGGCAGGCGCAGGCCGAG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MHIILMGPPGAGKGTQAVLLAGQEGIPHISTGDIFRAHMSQGTPLGKLAKEYVDAGKYVPDDVTNAMVRDRLAQPDCKKG FVLDGYPRTPEQARALDEMLAELGLALDAVINIDVPDELLVERAVGRRVCRSCGATYHVRFNPPREAGRCDRCGGELYQR SDDQEEKVAVRLNLYHSQTAPLLQFYKERGLVRTVRGDQPMDQVTADIKEAVRASR
Sequences:
>Translated_216_residues MHIILMGPPGAGKGTQAVLLAGQEGIPHISTGDIFRAHMSQGTPLGKLAKEYVDAGKYVPDDVTNAMVRDRLAQPDCKKG FVLDGYPRTPEQARALDEMLAELGLALDAVINIDVPDELLVERAVGRRVCRSCGATYHVRFNPPREAGRCDRCGGELYQR SDDQEEKVAVRLNLYHSQTAPLLQFYKERGLVRTVRGDQPMDQVTADIKEAVRASR >Mature_216_residues MHIILMGPPGAGKGTQAVLLAGQEGIPHISTGDIFRAHMSQGTPLGKLAKEYVDAGKYVPDDVTNAMVRDRLAQPDCKKG FVLDGYPRTPEQARALDEMLAELGLALDAVINIDVPDELLVERAVGRRVCRSCGATYHVRFNPPREAGRCDRCGGELYQR SDDQEEKVAVRLNLYHSQTAPLLQFYKERGLVRTVRGDQPMDQVTADIKEAVRASR
Specific function: This small ubiquitous enzyme is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=205, Percent_Identity=43.9024390243902, Blast_Score=186, Evalue=1e-47, Organism=Homo sapiens, GI4502013, Length=208, Percent_Identity=43.75, Blast_Score=186, Evalue=1e-47, Organism=Homo sapiens, GI19923437, Length=199, Percent_Identity=37.6884422110553, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI310110345, Length=198, Percent_Identity=34.8484848484849, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI53832003, Length=198, Percent_Identity=34.8484848484849, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI8051579, Length=198, Percent_Identity=34.8484848484849, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI53832001, Length=198, Percent_Identity=34.8484848484849, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI4502011, Length=207, Percent_Identity=30.9178743961353, Blast_Score=107, Evalue=6e-24, Organism=Homo sapiens, GI22749187, Length=198, Percent_Identity=31.8181818181818, Blast_Score=101, Evalue=6e-22, Organism=Homo sapiens, GI28144899, Length=212, Percent_Identity=26.4150943396226, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI28144897, Length=212, Percent_Identity=26.4150943396226, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI7706497, Length=212, Percent_Identity=25, Blast_Score=83, Evalue=2e-16, Organism=Escherichia coli, GI1786680, Length=215, Percent_Identity=50.2325581395349, Blast_Score=203, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17552384, Length=207, Percent_Identity=42.512077294686, Blast_Score=175, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17537943, Length=200, Percent_Identity=30.5, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17533833, Length=219, Percent_Identity=26.4840182648402, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17567503, Length=206, Percent_Identity=26.6990291262136, Blast_Score=87, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17550688, Length=215, Percent_Identity=23.7209302325581, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6320432, Length=209, Percent_Identity=45.933014354067, Blast_Score=186, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321018, Length=198, Percent_Identity=38.3838383838384, Blast_Score=132, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6322828, Length=216, Percent_Identity=27.3148148148148, Blast_Score=99, Evalue=6e-22, Organism=Drosophila melanogaster, GI22026816, Length=216, Percent_Identity=43.0555555555556, Blast_Score=174, Evalue=3e-44, Organism=Drosophila melanogaster, GI17737899, Length=196, Percent_Identity=37.7551020408163, Blast_Score=141, Evalue=3e-34, Organism=Drosophila melanogaster, GI24645822, Length=196, Percent_Identity=37.7551020408163, Blast_Score=141, Evalue=3e-34, Organism=Drosophila melanogaster, GI221459597, Length=214, Percent_Identity=23.8317757009346, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI21356893, Length=214, Percent_Identity=23.8317757009346, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24663208, Length=211, Percent_Identity=23.696682464455, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI17647141, Length=211, Percent_Identity=23.696682464455, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_SYMTH (Q67JW4)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076880.1 - ProteinModelPortal: Q67JW4 - SMR: Q67JW4 - GeneID: 2982188 - GenomeReviews: AP006840_GR - KEGG: sth:STH3054 - NMPDR: fig|292459.1.peg.2926 - HOGENOM: HBG630208 - OMA: EINQPLE - BioCyc: STHE292459:STH3054-MONOMER - BRENDA: 2.7.4.3 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid
EC number: =2.7.4.3
Molecular weight: Translated: 23798; Mature: 23798
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIILMGPPGAGKGTQAVLLAGQEGIPHISTGDIFRAHMSQGTPLGKLAKEYVDAGKYVP CEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCC DDVTNAMVRDRLAQPDCKKGFVLDGYPRTPEQARALDEMLAELGLALDAVINIDVPDELL HHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHH VERAVGRRVCRSCGATYHVRFNPPREAGRCDRCGGELYQRSDDQEEKVAVRLNLYHSQTA HHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCH PLLQFYKERGLVRTVRGDQPMDQVTADIKEAVRASR HHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MHIILMGPPGAGKGTQAVLLAGQEGIPHISTGDIFRAHMSQGTPLGKLAKEYVDAGKYVP CEEEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCC DDVTNAMVRDRLAQPDCKKGFVLDGYPRTPEQARALDEMLAELGLALDAVINIDVPDELL HHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCHHHH VERAVGRRVCRSCGATYHVRFNPPREAGRCDRCGGELYQRSDDQEEKVAVRLNLYHSQTA HHHHHHHHHHHHCCCEEEEEECCCHHCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCH PLLQFYKERGLVRTVRGDQPMDQVTADIKEAVRASR HHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA