Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894188

Identifier: 51894188

GI number: 51894188

Start: 3263563

End: 3263820

Strand: Reverse

Name: 51894188

Synonym: STH3053

Alternate gene names: NA

Gene position: 3263820-3263563 (Counterclockwise)

Preceding gene: 51894189

Following gene: 51894187

Centisome position: 91.52

GC content: 63.57

Gene sequence:

>258_bases
GTGCGCTCTCTGGCCGGACGCGACCTGGGAACATATTACGTCGTGGTGCGGGTGCTGGATGAGCGGTTCGTTGCAGTGGC
CAACGGCCAGCGACGTACGGTGTCTCGTCCGAAGGTGAAGAACCGGCGGCACCTCGAAGTAATCGGCTGGGTGGACGCCT
CGCTGGCTCTCCGACTGGAACGAGGCGCCAAGGTCACCGACGAACAGATCGCCAAGGCCCTGGAGACCATGCCTGCGAGA
GTCTACGAGGGGGTTTAG

Upstream 100 bases:

>100_bases
TACTTATGATATTGGCCTTTCACCGTGTAAGCCCGACATGCGAGTGCGATGACGGAGGTGCACGAACGTGGATCAACCGG
GTCTAAGGCCCGGCGCCATC

Downstream 100 bases:

>100_bases
AACGGGCGTATGTCGAAGGACGACGTCATTGAGGTTGAGGGCACCGTCGTCGAGAATCTGCCCAATGCGATGTTCCGCGT
GGAGCTGCCCAACGGTCATC

Product: ribosomal protein L14E

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLERGAKVTDEQIAKALETMPAR
VYEGV

Sequences:

>Translated_85_residues
MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLERGAKVTDEQIAKALETMPAR
VYEGV
>Mature_85_residues
MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLERGAKVTDEQIAKALETMPAR
VYEGV

Specific function: Unknown

COG id: COG2163

COG function: function code J; Ribosomal protein L14E/L6E/L27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9609; Mature: 9609

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLE
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHEEEC
RGAKVTDEQIAKALETMPARVYEGV
CCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLE
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHEEEC
RGAKVTDEQIAKALETMPARVYEGV
CCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA