| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894188
Identifier: 51894188
GI number: 51894188
Start: 3263563
End: 3263820
Strand: Reverse
Name: 51894188
Synonym: STH3053
Alternate gene names: NA
Gene position: 3263820-3263563 (Counterclockwise)
Preceding gene: 51894189
Following gene: 51894187
Centisome position: 91.52
GC content: 63.57
Gene sequence:
>258_bases GTGCGCTCTCTGGCCGGACGCGACCTGGGAACATATTACGTCGTGGTGCGGGTGCTGGATGAGCGGTTCGTTGCAGTGGC CAACGGCCAGCGACGTACGGTGTCTCGTCCGAAGGTGAAGAACCGGCGGCACCTCGAAGTAATCGGCTGGGTGGACGCCT CGCTGGCTCTCCGACTGGAACGAGGCGCCAAGGTCACCGACGAACAGATCGCCAAGGCCCTGGAGACCATGCCTGCGAGA GTCTACGAGGGGGTTTAG
Upstream 100 bases:
>100_bases TACTTATGATATTGGCCTTTCACCGTGTAAGCCCGACATGCGAGTGCGATGACGGAGGTGCACGAACGTGGATCAACCGG GTCTAAGGCCCGGCGCCATC
Downstream 100 bases:
>100_bases AACGGGCGTATGTCGAAGGACGACGTCATTGAGGTTGAGGGCACCGTCGTCGAGAATCTGCCCAATGCGATGTTCCGCGT GGAGCTGCCCAACGGTCATC
Product: ribosomal protein L14E
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLERGAKVTDEQIAKALETMPAR VYEGV
Sequences:
>Translated_85_residues MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLERGAKVTDEQIAKALETMPAR VYEGV >Mature_85_residues MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLERGAKVTDEQIAKALETMPAR VYEGV
Specific function: Unknown
COG id: COG2163
COG function: function code J; Ribosomal protein L14E/L6E/L27E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9609; Mature: 9609
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLE CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHEEEC RGAKVTDEQIAKALETMPARVYEGV CCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSLAGRDLGTYYVVVRVLDERFVAVANGQRRTVSRPKVKNRRHLEVIGWVDASLALRLE CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHEEEC RGAKVTDEQIAKALETMPARVYEGV CCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA