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The map label for this gene is fliF [H]

Identifier: 51894139

GI number: 51894139

Start: 3222019

End: 3223749

Strand: Reverse

Name: fliF [H]

Synonym: STH3003

Alternate gene names: 51894139

Gene position: 3223749-3222019 (Counterclockwise)

Preceding gene: 51894140

Following gene: 51894138

Centisome position: 90.4

GC content: 70.25

Gene sequence:

>1731_bases
TTGGCTAATGCGGGCTCCGATGTGATGGGGCGAGTCAAGCAAATCTGGGGCGGGATGAGCCGGCCGGTGCGCTGGCTCAC
CGTGGGCCTGCTGGTGGCGCTGGCCCTCTCCCTCGCCGTCGCCGTCTACCTGAACCGGCCGCGGTGGGAGGTCTTCTACA
AGGCCAGTGACCCCAGCGAGGTCAGCACGCTGGTGGCGCACCTGGATGAACTGGGTGTACCGAGCCGCGTCACCGGCAAC
GGGCTGGTCATCGAGGTGCCCGCCCGGGAGCGCAGCGCCGCCAACCTGGCCAAGGCGCAGGCCGGCCTGCCCAGCTCGGG
ACACGTGGGCCTCGAGATCTTCGCCCAGCCCCAGTTCGGCGCAACCGAGTTCGACCGCCAGGTGAACTACAAACGGGCGA
TGGAGGGGGAGCTGTCCCGCTCCCTGATGCGCATCGCCGACATCGAATACGCCAAAGTGAATCTCAATGTACCCGAAAAG
TCCGTCTTCGTGCGGGATGAGGAGCCGCCCTCGGCCGCGGTCCTCGTTCAGCTCCGGTCCGGACGGACCCTCGACGCGGA
TAACGTCACCGCAATCATCAATTTCGTTGCCAGCTCCGTCGAGGGGCTGACGCCGGACCGGGTGACGGTGATCGACAGCC
AGGGACGGGAGCTCAGGCCCGCCGACGACGATGCGCAGCGGCTCGACGCCGAGGCGCTCGCCTTCCAGCGGCAGCGGGAG
GAGCAGCTGACGCAGAAGCTCCTCCAGGTGCTGGAGCCGATCTTCGGTCGGGGCAACGTCGCGGCTTCCGTGACGGTGGA
GCTGGACCACCAGTCCTCCCGCACCGAGGAGCGGATCGTGGGCCAGGGCGTGCCCGTCGCCACCGTGTCGGAGCGGTCGG
GCTCCCAGACCCAGGGCACCAGCACCGAGCCCGCGCCGGTCAGCACGCAACTGCCCGGCCAGGGGGAGACCCCGGGGGTC
ACCGCGCCCGCCGTGCCCATCTACCAGGAGCCCAGCGTCTCCACGGAGTCCGGCGAGTCCTACCAGAGCCGCACCGAGAC
CCGGTACGACGTGGGCGAGCGGAACCAGGTCACCGTGTCGCCCGCCGGTTCGGTGAAGCGCATCAGCGCGGCGGTGACCA
TCAACCAGGATACCCTGACCCAGTCCGAGATCGACCTGATTCGACAGCACGCGGCCAGCGCCACCGGGGCGCAGCTTTCC
GACGTGACCGTACTGGCCATGTCCTTCCGCCCGACCGCGCAGGCGGATGCTGCGCCGCCCGCGCCGGAGGCTGCGGCGGG
TTCCCGGCTCTTTGACGCCAGGGCCCTGGCCATCGGCCTCGGGATCGCGTCGTTCCTGCTGATTCTGGCCGCGCTGCTGA
CGCGGCGGCGCGAGTCCGAGCCCGAGTTTGCGCTGCCGGGCCATCCGGCCGTGGGCACGGCCCTCGACGTGGCGCTGGGG
CTCGACCAGCCGCTTCCGGTCCAGCAGGCCGCGGCCGCAGAGGCGGCGCCGGCGGCACCGGAGGCACCGGAGGCAGCCCC
CGCCGAGGAGACCGACGTGCAAATCACAGGGGAGATGACGGCCGCGGAGAAGTTCGAGGAAGTCATGAAGCGGCGGCGGC
CCCCGCGGCAGCCGATCGATCCGGAGGATTTCATGGACGACGACATCCTGGCCGACATCGACGTGCTGCTTGAGCAGGCG
CCCGAGGCCTGCGCCGAGGTCATCCGGCACTGGCTGAAGGGGGGGATCTAG

Upstream 100 bases:

>100_bases
CCGGAACAAGGTCATTGAGGCCTACCAGGAAATCATGCGCATGACCTTCTAAGTCAAGACCTAGACCGCACCTGCACCAA
CCTCAGCGGGGGGAGACCAC

Downstream 100 bases:

>100_bases
CGCTTGGCAGACCGTGACCAGAAACTGACCAGCCGGCAGAAGGCGGCGATCTTCTGCATCAACATCGGCGTTGAGCGCTC
GGCGAAGATCCTGAAGCACC

Product: flagellar basal-body M-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 575

Protein sequence:

>576_residues
MANAGSDVMGRVKQIWGGMSRPVRWLTVGLLVALALSLAVAVYLNRPRWEVFYKASDPSEVSTLVAHLDELGVPSRVTGN
GLVIEVPARERSAANLAKAQAGLPSSGHVGLEIFAQPQFGATEFDRQVNYKRAMEGELSRSLMRIADIEYAKVNLNVPEK
SVFVRDEEPPSAAVLVQLRSGRTLDADNVTAIINFVASSVEGLTPDRVTVIDSQGRELRPADDDAQRLDAEALAFQRQRE
EQLTQKLLQVLEPIFGRGNVAASVTVELDHQSSRTEERIVGQGVPVATVSERSGSQTQGTSTEPAPVSTQLPGQGETPGV
TAPAVPIYQEPSVSTESGESYQSRTETRYDVGERNQVTVSPAGSVKRISAAVTINQDTLTQSEIDLIRQHAASATGAQLS
DVTVLAMSFRPTAQADAAPPAPEAAAGSRLFDARALAIGLGIASFLLILAALLTRRRESEPEFALPGHPAVGTALDVALG
LDQPLPVQQAAAAEAAPAAPEAPEAAPAEETDVQITGEMTAAEKFEEVMKRRRPPRQPIDPEDFMDDDILADIDVLLEQA
PEACAEVIRHWLKGGI

Sequences:

>Translated_576_residues
MANAGSDVMGRVKQIWGGMSRPVRWLTVGLLVALALSLAVAVYLNRPRWEVFYKASDPSEVSTLVAHLDELGVPSRVTGN
GLVIEVPARERSAANLAKAQAGLPSSGHVGLEIFAQPQFGATEFDRQVNYKRAMEGELSRSLMRIADIEYAKVNLNVPEK
SVFVRDEEPPSAAVLVQLRSGRTLDADNVTAIINFVASSVEGLTPDRVTVIDSQGRELRPADDDAQRLDAEALAFQRQRE
EQLTQKLLQVLEPIFGRGNVAASVTVELDHQSSRTEERIVGQGVPVATVSERSGSQTQGTSTEPAPVSTQLPGQGETPGV
TAPAVPIYQEPSVSTESGESYQSRTETRYDVGERNQVTVSPAGSVKRISAAVTINQDTLTQSEIDLIRQHAASATGAQLS
DVTVLAMSFRPTAQADAAPPAPEAAAGSRLFDARALAIGLGIASFLLILAALLTRRRESEPEFALPGHPAVGTALDVALG
LDQPLPVQQAAAAEAAPAAPEAPEAAPAEETDVQITGEMTAAEKFEEVMKRRRPPRQPIDPEDFMDDDILADIDVLLEQA
PEACAEVIRHWLKGGI
>Mature_575_residues
ANAGSDVMGRVKQIWGGMSRPVRWLTVGLLVALALSLAVAVYLNRPRWEVFYKASDPSEVSTLVAHLDELGVPSRVTGNG
LVIEVPARERSAANLAKAQAGLPSSGHVGLEIFAQPQFGATEFDRQVNYKRAMEGELSRSLMRIADIEYAKVNLNVPEKS
VFVRDEEPPSAAVLVQLRSGRTLDADNVTAIINFVASSVEGLTPDRVTVIDSQGRELRPADDDAQRLDAEALAFQRQREE
QLTQKLLQVLEPIFGRGNVAASVTVELDHQSSRTEERIVGQGVPVATVSERSGSQTQGTSTEPAPVSTQLPGQGETPGVT
APAVPIYQEPSVSTESGESYQSRTETRYDVGERNQVTVSPAGSVKRISAAVTINQDTLTQSEIDLIRQHAASATGAQLSD
VTVLAMSFRPTAQADAAPPAPEAAAGSRLFDARALAIGLGIASFLLILAALLTRRRESEPEFALPGHPAVGTALDVALGL
DQPLPVQQAAAAEAAPAAPEAPEAAPAEETDVQITGEMTAAEKFEEVMKRRRPPRQPIDPEDFMDDDILADIDVLLEQAP
EACAEVIRHWLKGGI

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=402, Percent_Identity=32.8358208955224, Blast_Score=182, Evalue=7e-47,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 61565; Mature: 61434

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAGSDVMGRVKQIWGGMSRPVRWLTVGLLVALALSLAVAVYLNRPRWEVFYKASDPSE
CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
VSTLVAHLDELGVPSRVTGNGLVIEVPARERSAANLAKAQAGLPSSGHVGLEIFAQPQFG
HHHHHHHHHHCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
ATEFDRQVNYKRAMEGELSRSLMRIADIEYAKVNLNVPEKSVFVRDEEPPSAAVLVQLRS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCEEEEEEECC
GRTLDADNVTAIINFVASSVEGLTPDRVTVIDSQGRELRPADDDAQRLDAEALAFQRQRE
CCEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EQLTQKLLQVLEPIFGRGNVAASVTVELDHQSSRTEERIVGQGVPVATVSERSGSQTQGT
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCC
STEPAPVSTQLPGQGETPGVTAPAVPIYQEPSVSTESGESYQSRTETRYDVGERNQVTVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCEEEEC
PAGSVKRISAAVTINQDTLTQSEIDLIRQHAASATGAQLSDVTVLAMSFRPTAQADAAPP
CCCCCEEEEEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCC
APEAAAGSRLFDARALAIGLGIASFLLILAALLTRRRESEPEFALPGHPAVGTALDVALG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC
LDQPLPVQQAAAAEAAPAAPEAPEAAPAEETDVQITGEMTAAEKFEEVMKRRRPPRQPID
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC
PEDFMDDDILADIDVLLEQAPEACAEVIRHWLKGGI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANAGSDVMGRVKQIWGGMSRPVRWLTVGLLVALALSLAVAVYLNRPRWEVFYKASDPSE
CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHH
VSTLVAHLDELGVPSRVTGNGLVIEVPARERSAANLAKAQAGLPSSGHVGLEIFAQPQFG
HHHHHHHHHHCCCCCEECCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
ATEFDRQVNYKRAMEGELSRSLMRIADIEYAKVNLNVPEKSVFVRDEEPPSAAVLVQLRS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCCCEEEEEEECC
GRTLDADNVTAIINFVASSVEGLTPDRVTVIDSQGRELRPADDDAQRLDAEALAFQRQRE
CCEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EQLTQKLLQVLEPIFGRGNVAASVTVELDHQSSRTEERIVGQGVPVATVSERSGSQTQGT
HHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCEEEECCCCCCCCCCC
STEPAPVSTQLPGQGETPGVTAPAVPIYQEPSVSTESGESYQSRTETRYDVGERNQVTVS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCCEEEEC
PAGSVKRISAAVTINQDTLTQSEIDLIRQHAASATGAQLSDVTVLAMSFRPTAQADAAPP
CCCCCEEEEEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCC
APEAAAGSRLFDARALAIGLGIASFLLILAALLTRRRESEPEFALPGHPAVGTALDVALG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHC
LDQPLPVQQAAAAEAAPAAPEAPEAAPAEETDVQITGEMTAAEKFEEVMKRRRPPRQPID
CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC
PEDFMDDDILADIDVLLEQAPEACAEVIRHWLKGGI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]