| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is fliG [H]
Identifier: 51894138
GI number: 51894138
Start: 3220999
End: 3222015
Strand: Reverse
Name: fliG [H]
Synonym: STH3002
Alternate gene names: 51894138
Gene position: 3222015-3220999 (Counterclockwise)
Preceding gene: 51894139
Following gene: 51894137
Centisome position: 90.35
GC content: 66.18
Gene sequence:
>1017_bases TTGGCAGACCGTGACCAGAAACTGACCAGCCGGCAGAAGGCGGCGATCTTCTGCATCAACATCGGCGTTGAGCGCTCGGC GAAGATCCTGAAGCACCTCCGGGACGACGAGATCGAGATGCTCACCGTCGAGATCGCCCAGTCCCGTAAGGTGACCCCCG AGGTACGGGACCAGGTGCTCACCGAGTTCATCATGGTGGCCACGGCTGATAAACACATTCGCACGGGCGGCATCGATTAT GCCCGTGAGATGCTCGAAAAGGCGCTGGGACAGGAGCGGGCGCGCGACATCCTGACCCGCCTGACCTCCCACCTCCGGCG CCGTCCCTTCGACGCCGTGCGGCACACGGATCCGGTGCACCTGGCCTCGTTCCTGCAGAACGAGCATCCCCAGACCGTCG CCGTCATCATGGCCCACCTCGACGCGGACAAGGCGGCGCAGGTGCTGCTGGGCCTCCCGCCGGAGCGGCAGGCCGACATC ATCCGCCGGGTGGCGACGCTCGACCGCACATCGCCGGAGATGCTCCGCGAGGTCGAGAAGGTGTTGGAGCGCAAGGCTTC GGCCATCGTCAGCCAGGAGTCGACCGCGGCCGGCGGCATCAACTGGGCGGTGGACGTCCTCAACCGGGTCGACCGCACCA CCGAGAAGACCATCATGGGCCTGCTCTCGGCGGACGACCCCGACCTGGCCAGCGAGATCGCCCAGCGGATGTTCCTCTTC GACGACATCGTCAACCTCGACGACCGCACCGTGCAGCGGATCCTGCGCGAGGTGGACATGAACAAGGATCTGCCGCTCGC CCTCAAGGCCGCCAAGGAAGAGGTCTGGCGCAAGATCATGAACAACGTCTCCAAGCGGGCCGGCGAGGCCCTCAGGGAGG CCGTGGAGTACCTGGGCCCCGTGCGCATCCGCGACGTGGAAGAGGCGCAAGCCCGCATCGTCGCCCTGATCAGGCGGCTT GAGGAGTCCGGCGAGATCCAGATCGCCAGGGGTGGTGGCGCTGATGAGTACATCTAG
Upstream 100 bases:
>100_bases GGACGACGACATCCTGGCCGACATCGACGTGCTGCTTGAGCAGGCGCCCGAGGCCTGCGCCGAGGTCATCCGGCACTGGC TGAAGGGGGGGATCTAGCGC
Downstream 100 bases:
>100_bases GTCCGGCAAGCTCCCACCCGGGGTGGAGGTACGGGCCCCTTCGTGGCCGCAGCTCCCGCCGCCCCCGCCGCCGTCTCCGC CGCCGCCCAGCCCGCCGAAG
Product: flagellar motor switch protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MADRDQKLTSRQKAAIFCINIGVERSAKILKHLRDDEIEMLTVEIAQSRKVTPEVRDQVLTEFIMVATADKHIRTGGIDY AREMLEKALGQERARDILTRLTSHLRRRPFDAVRHTDPVHLASFLQNEHPQTVAVIMAHLDADKAAQVLLGLPPERQADI IRRVATLDRTSPEMLREVEKVLERKASAIVSQESTAAGGINWAVDVLNRVDRTTEKTIMGLLSADDPDLASEIAQRMFLF DDIVNLDDRTVQRILREVDMNKDLPLALKAAKEEVWRKIMNNVSKRAGEALREAVEYLGPVRIRDVEEAQARIVALIRRL EESGEIQIARGGGADEYI
Sequences:
>Translated_338_residues MADRDQKLTSRQKAAIFCINIGVERSAKILKHLRDDEIEMLTVEIAQSRKVTPEVRDQVLTEFIMVATADKHIRTGGIDY AREMLEKALGQERARDILTRLTSHLRRRPFDAVRHTDPVHLASFLQNEHPQTVAVIMAHLDADKAAQVLLGLPPERQADI IRRVATLDRTSPEMLREVEKVLERKASAIVSQESTAAGGINWAVDVLNRVDRTTEKTIMGLLSADDPDLASEIAQRMFLF DDIVNLDDRTVQRILREVDMNKDLPLALKAAKEEVWRKIMNNVSKRAGEALREAVEYLGPVRIRDVEEAQARIVALIRRL EESGEIQIARGGGADEYI >Mature_337_residues ADRDQKLTSRQKAAIFCINIGVERSAKILKHLRDDEIEMLTVEIAQSRKVTPEVRDQVLTEFIMVATADKHIRTGGIDYA REMLEKALGQERARDILTRLTSHLRRRPFDAVRHTDPVHLASFLQNEHPQTVAVIMAHLDADKAAQVLLGLPPERQADII RRVATLDRTSPEMLREVEKVLERKASAIVSQESTAAGGINWAVDVLNRVDRTTEKTIMGLLSADDPDLASEIAQRMFLFD DIVNLDDRTVQRILREVDMNKDLPLALKAAKEEVWRKIMNNVSKRAGEALREAVEYLGPVRIRDVEEAQARIVALIRRLE ESGEIQIARGGGADEYI
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=340, Percent_Identity=32.3529411764706, Blast_Score=174, Evalue=7e-45,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 38174; Mature: 38043
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRDQKLTSRQKAAIFCINIGVERSAKILKHLRDDEIEMLTVEIAQSRKVTPEVRDQVL CCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH TEFIMVATADKHIRTGGIDYAREMLEKALGQERARDILTRLTSHLRRRPFDAVRHTDPVH HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHH LASFLQNEHPQTVAVIMAHLDADKAAQVLLGLPPERQADIIRRVATLDRTSPEMLREVEK HHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH VLERKASAIVSQESTAAGGINWAVDVLNRVDRTTEKTIMGLLSADDPDLASEIAQRMFLF HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DDIVNLDDRTVQRILREVDMNKDLPLALKAAKEEVWRKIMNNVSKRAGEALREAVEYLGP HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VRIRDVEEAQARIVALIRRLEESGEIQIARGGGADEYI CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure ADRDQKLTSRQKAAIFCINIGVERSAKILKHLRDDEIEMLTVEIAQSRKVTPEVRDQVL CCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH TEFIMVATADKHIRTGGIDYAREMLEKALGQERARDILTRLTSHLRRRPFDAVRHTDPVH HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHH LASFLQNEHPQTVAVIMAHLDADKAAQVLLGLPPERQADIIRRVATLDRTSPEMLREVEK HHHHHCCCCCHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH VLERKASAIVSQESTAAGGINWAVDVLNRVDRTTEKTIMGLLSADDPDLASEIAQRMFLF HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH DDIVNLDDRTVQRILREVDMNKDLPLALKAAKEEVWRKIMNNVSKRAGEALREAVEYLGP HHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VRIRDVEEAQARIVALIRRLEESGEIQIARGGGADEYI CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1828465; 9384377 [H]