| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is fliK
Identifier: 51894133
GI number: 51894133
Start: 3216348
End: 3217676
Strand: Reverse
Name: fliK
Synonym: STH2997
Alternate gene names: NA
Gene position: 3217676-3216348 (Counterclockwise)
Preceding gene: 51894134
Following gene: 51894132
Centisome position: 90.23
GC content: 79.23
Gene sequence:
>1329_bases GTGACGGCACCGATCGTGAGTGCGGGCGGAGCGCCCCAGGCCCCGGTGGCGACCCGCGGAGAGGGCAGGCGCAGAAGCGA AGCTTCCCCGGCCGACGGCACCTTCGCGGCGGTGCTGGCCGCGCTGGCCCCCATGCCGTCGCCGCCTGACGCCCCCGGGG CGGGTGCGGCGGTTCCTACAGGACAGGCCCCGCCGGCCGGAGCCGGGCTCCCCGATCCGATCCAGGCGCTGTTGGGACCG GCCAATCCGGCTGGCCCGCAGGCGATGCTGCCCGCGGCGTTTCCCGGGGAGGCCGCCGGGGCCCCGGACGGGCAGGCTGA CGCCGCCGCGGCGCCGGCCGGCCTGACGGTCGAAGTGATCGCCGCGGAGCAGGCGGCGCCGGGGCAGGCCGGGCAGGATC CGCTGGCGAACCTGCTGCGGCCGCAGGGGCCGGAGCCCCCGGGCCCGGGGACGGGAGATCTGCCGGCCGGGTCGCCGGCA CAGGGCGGCCAGGCGGCGCCGGCGGAGGCCGGTGAGGCCTGGATGGCGGCGCGGGATCGGCCGCAGCCGGCCGTCCTGCC CGATGGGGCCCCCGCCGGGCAGGCCGCGGAGGCCGACGCGGCGGCGAGACCGTCTGCAGGACCCGCGCCGGGCGGGATGC CGGACGGGGCGGCGAGACCGTCTGCAGGACCCGCGCCGGGCGGGATGCCGGACGGGGCGGCGGTCCGCGGGGCCACGGAA TCGCTGGCCAGTGAGGGCTCCGCCGCGGGGGACGGCGCATCGGCCGAGGAAGGAAGTCCGCAGGGCACGGCGGTGCGGCA GGCGCCCGACGCCGCGCCGGCCACCGGGCCTGATCCGGGAGGCGGCGCCGAGGTCGCTGCCCGGCCGGTGTCGATGAGGG GGCTGGAGCGGCTCACCGCCGGCCGGCTGCAGGCGGAGCACCTAGTGAACGAGCTGACCCGGGCGCTGCCCGAACTGCCG GACGGCCAGTACCGGCTGACCCTGCGGCTGCACCCCGAGCACCTGGGCGAGGTGCGGCTGGAGCTGCACCTGAGCGGTCG TGAGGTGTACGCCGCCATGGAGGTGTCCAGCGCCGACGCCCGCCAGGCGCTGGAGAGCCGGGGCGAGCAGCTCCGGCAGG GCCTGAGCGATGCCGGGTACCAGCTCGCAGGGTTCGAGGTGGCTACCGGCCAGGGGCGGCAGGCCCGCCAGGGCGGCGAC GAGGATCCGGCGGGGTGGCCCCGGGCGTCCGGCCGCAGCGTGAAGGCGACCGAGGCCGAGGCCGCACTGGCGGCCGCTGC CGGGCGATCTGCCGGCCCCCGGAGCGGGCGGCTGGACACGTTGGCGTAG
Upstream 100 bases:
>100_bases TGAAACAGATGAAGACCGACGACGCAGCGGCGATTCTGGCGGCGATGGAGGAGAACCGGGCAGCCGCGCTGCTGCGGGCC TATGCAGAGGAGGTAGAGCC
Downstream 100 bases:
>100_bases GAGGCGGTAGGCGATGAGTGTGAACGGCGTTCAAGGGGTCCAGCCGGGTACGGCCTCCGGCGCCGGGCAGACCGCTGAGA GCAGGAGGCCCACCGACCAG
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTAPIVSAGGAPQAPVATRGEGRRRSEASPADGTFAAVLAALAPMPSPPDAPGAGAAVPTGQAPPAGAGLPDPIQALLGP ANPAGPQAMLPAAFPGEAAGAPDGQADAAAAPAGLTVEVIAAEQAAPGQAGQDPLANLLRPQGPEPPGPGTGDLPAGSPA QGGQAAPAEAGEAWMAARDRPQPAVLPDGAPAGQAAEADAAARPSAGPAPGGMPDGAARPSAGPAPGGMPDGAAVRGATE SLASEGSAAGDGASAEEGSPQGTAVRQAPDAAPATGPDPGGGAEVAARPVSMRGLERLTAGRLQAEHLVNELTRALPELP DGQYRLTLRLHPEHLGEVRLELHLSGREVYAAMEVSSADARQALESRGEQLRQGLSDAGYQLAGFEVATGQGRQARQGGD EDPAGWPRASGRSVKATEAEAALAAAAGRSAGPRSGRLDTLA
Sequences:
>Translated_442_residues MTAPIVSAGGAPQAPVATRGEGRRRSEASPADGTFAAVLAALAPMPSPPDAPGAGAAVPTGQAPPAGAGLPDPIQALLGP ANPAGPQAMLPAAFPGEAAGAPDGQADAAAAPAGLTVEVIAAEQAAPGQAGQDPLANLLRPQGPEPPGPGTGDLPAGSPA QGGQAAPAEAGEAWMAARDRPQPAVLPDGAPAGQAAEADAAARPSAGPAPGGMPDGAARPSAGPAPGGMPDGAAVRGATE SLASEGSAAGDGASAEEGSPQGTAVRQAPDAAPATGPDPGGGAEVAARPVSMRGLERLTAGRLQAEHLVNELTRALPELP DGQYRLTLRLHPEHLGEVRLELHLSGREVYAAMEVSSADARQALESRGEQLRQGLSDAGYQLAGFEVATGQGRQARQGGD EDPAGWPRASGRSVKATEAEAALAAAAGRSAGPRSGRLDTLA >Mature_441_residues TAPIVSAGGAPQAPVATRGEGRRRSEASPADGTFAAVLAALAPMPSPPDAPGAGAAVPTGQAPPAGAGLPDPIQALLGPA NPAGPQAMLPAAFPGEAAGAPDGQADAAAAPAGLTVEVIAAEQAAPGQAGQDPLANLLRPQGPEPPGPGTGDLPAGSPAQ GGQAAPAEAGEAWMAARDRPQPAVLPDGAPAGQAAEADAAARPSAGPAPGGMPDGAARPSAGPAPGGMPDGAAVRGATES LASEGSAAGDGASAEEGSPQGTAVRQAPDAAPATGPDPGGGAEVAARPVSMRGLERLTAGRLQAEHLVNELTRALPELPD GQYRLTLRLHPEHLGEVRLELHLSGREVYAAMEVSSADARQALESRGEQLRQGLSDAGYQLAGFEVATGQGRQARQGGDE DPAGWPRASGRSVKATEAEAALAAAAGRSAGPRSGRLDTLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43002; Mature: 42870
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPIVSAGGAPQAPVATRGEGRRRSEASPADGTFAAVLAALAPMPSPPDAPGAGAAVPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC GQAPPAGAGLPDPIQALLGPANPAGPQAMLPAAFPGEAAGAPDGQADAAAAPAGLTVEVI CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE AAEQAAPGQAGQDPLANLLRPQGPEPPGPGTGDLPAGSPAQGGQAAPAEAGEAWMAARDR ECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC PQPAVLPDGAPAGQAAEADAAARPSAGPAPGGMPDGAARPSAGPAPGGMPDGAAVRGATE CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH SLASEGSAAGDGASAEEGSPQGTAVRQAPDAAPATGPDPGGGAEVAARPVSMRGLERLTA HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH GRLQAEHLVNELTRALPELPDGQYRLTLRLHPEHLGEVRLELHLSGREVYAAMEVSSADA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCEEEEEEECCCEEEEEEECCCHHH RQALESRGEQLRQGLSDAGYQLAGFEVATGQGRQARQGGDEDPAGWPRASGRSVKATEAE HHHHHHHHHHHHHHHHHCCCEEECEEEECCCCCHHHCCCCCCCCCCCCCCCCCEEHHHHH AALAAAAGRSAGPRSGRLDTLA HHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TAPIVSAGGAPQAPVATRGEGRRRSEASPADGTFAAVLAALAPMPSPPDAPGAGAAVPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC GQAPPAGAGLPDPIQALLGPANPAGPQAMLPAAFPGEAAGAPDGQADAAAAPAGLTVEVI CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEE AAEQAAPGQAGQDPLANLLRPQGPEPPGPGTGDLPAGSPAQGGQAAPAEAGEAWMAARDR ECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC PQPAVLPDGAPAGQAAEADAAARPSAGPAPGGMPDGAARPSAGPAPGGMPDGAAVRGATE CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHH SLASEGSAAGDGASAEEGSPQGTAVRQAPDAAPATGPDPGGGAEVAARPVSMRGLERLTA HHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH GRLQAEHLVNELTRALPELPDGQYRLTLRLHPEHLGEVRLELHLSGREVYAAMEVSSADA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHCCCEEEEEEECCCEEEEEEECCCHHH RQALESRGEQLRQGLSDAGYQLAGFEVATGQGRQARQGGDEDPAGWPRASGRSVKATEAE HHHHHHHHHHHHHHHHHCCCEEECEEEECCCCCHHHCCCCCCCCCCCCCCCCCEEHHHHH AALAAAAGRSAGPRSGRLDTLA HHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA