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The map label for this gene is flgD

Identifier: 51894132

GI number: 51894132

Start: 3215915

End: 3216334

Strand: Reverse

Name: flgD

Synonym: STH2996

Alternate gene names: NA

Gene position: 3216334-3215915 (Counterclockwise)

Preceding gene: 51894133

Following gene: 51894131

Centisome position: 90.19

GC content: 66.43

Gene sequence:

>420_bases
ATGAGTGTGAACGGCGTTCAAGGGGTCCAGCCGGGTACGGCCTCCGGCGCCGGGCAGACCGCTGAGAGCAGGAGGCCCAC
CGACCAGCTGGGCAAGATGGAGTTCCTGCAGCTGCTGGTCACGCAGCTGCGGTATCAGGACCCGCTCAACCCCATCGACG
ACCGGGAGTTCATGGCGCAGCTCGCGCAGTTCTCGGCCCTGGAGCAGATGACCGAAAACGTCCGCTGGGCGCGGCTCAGC
TACGGGCTCAGCCTCGTCGGCGCCGCGGTGAAGTACTGGGGGACCGAGGGGCAGCCGGAGATCGGCATCGTGTACGCCGT
TCGGATCGACAGCGGTGAACCGCTGCTCAACCTCGGCAACCGGGAGATCCGGCTCGAGCAGGTGATCGAGGTCGCACCGC
CCAGCTTCGAAGAAGAGTAA

Upstream 100 bases:

>100_bases
AAGGCGACCGAGGCCGAGGCCGCACTGGCGGCCGCTGCCGGGCGATCTGCCGGCCCCCGGAGCGGGCGGCTGGACACGTT
GGCGTAGGAGGCGGTAGGCG

Downstream 100 bases:

>100_bases
GGGGAGGTAGTCTGGCATGCGTTCGCTGTATTCCGGCGTTTCGGGTATCCGCAGCCACCAGACGCGGATGGACGTGATCG
GCAACAACATCGCCAACGTC

Product: flagellar hook assembly protein

Products: NA

Alternate protein names: Flagellar Basal Body Rod Protein; Flagellar Hook Assembly Protein; Basal-Body Rod Protein FlgD; Flagellar Basal-Body Rod Protein FlgD; Flagellar Hook Assembly Scaffolding Protein; Endoflagellar Hook Capping Protein

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSVNGVQGVQPGTASGAGQTAESRRPTDQLGKMEFLQLLVTQLRYQDPLNPIDDREFMAQLAQFSALEQMTENVRWARLS
YGLSLVGAAVKYWGTEGQPEIGIVYAVRIDSGEPLLNLGNREIRLEQVIEVAPPSFEEE

Sequences:

>Translated_139_residues
MSVNGVQGVQPGTASGAGQTAESRRPTDQLGKMEFLQLLVTQLRYQDPLNPIDDREFMAQLAQFSALEQMTENVRWARLS
YGLSLVGAAVKYWGTEGQPEIGIVYAVRIDSGEPLLNLGNREIRLEQVIEVAPPSFEEE
>Mature_138_residues
SVNGVQGVQPGTASGAGQTAESRRPTDQLGKMEFLQLLVTQLRYQDPLNPIDDREFMAQLAQFSALEQMTENVRWARLSY
GLSLVGAAVKYWGTEGQPEIGIVYAVRIDSGEPLLNLGNREIRLEQVIEVAPPSFEEE

Specific function: Unknown

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15381; Mature: 15249

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNGVQGVQPGTASGAGQTAESRRPTDQLGKMEFLQLLVTQLRYQDPLNPIDDREFMAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LAQFSALEQMTENVRWARLSYGLSLVGAAVKYWGTEGQPEIGIVYAVRIDSGEPLLNLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHCCC
REIRLEQVIEVAPPSFEEE
CHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SVNGVQGVQPGTASGAGQTAESRRPTDQLGKMEFLQLLVTQLRYQDPLNPIDDREFMAQ
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LAQFSALEQMTENVRWARLSYGLSLVGAAVKYWGTEGQPEIGIVYAVRIDSGEPLLNLGN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHCCC
REIRLEQVIEVAPPSFEEE
CHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA