| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894119
Identifier: 51894119
GI number: 51894119
Start: 3204151
End: 3204894
Strand: Reverse
Name: 51894119
Synonym: STH2983
Alternate gene names: NA
Gene position: 3204894-3204151 (Counterclockwise)
Preceding gene: 51894120
Following gene: 51894118
Centisome position: 89.87
GC content: 73.79
Gene sequence:
>744_bases ATGGAGACCTTTCTCTATCTCGTCCTGGCCCTGGCAGCGGTCGGCGCGCTGGCCTACGCCGTTTACCAGGTGACGGTCAG GCAGCAGCGGATGCTGGCGGAGATCACCCGGCTGGAGCGGCTGACGGCCGAGGTGATCATGAGCGCCGAGGCCCTGCTGG ATGAGATCGACCAGCGGATGGCGCGGCTCAACGACCTGGCCGCCCAGTTGGAGATCCGGGCGGTCGCCGAGGTGCAGGCG AAGGCGCGGTCCCGGGCCAAGTCCGGGACGCAGCCGCAGGCGGACGCGCCGCCGGACGGGCGTCCTCCGGCCCCTGCGCC GCCGGACGCCGGGGACCAGGAAGCGCCTCAGCCGCAACCGGAGCGAGCGCCGGAGGTCGAAGCCGCCCAGCAGAAGCCGA AGCGAGGCCGGCGGTCCCGCGCCGGGGCCGGGAGCACAGCCGTGCCATCCGGTCCGGCGGCGGGCTCCCAGCAGGCGGGG GGTTCCCGGCAGGCTGCAGACTCGGGACAATTCGCAAGCCCCGGGCAACCGTCGCAGCCGGCAGAGGCCCCTCCCGCGGA GCCTTCGCCCGCGGAGCCGGCACGCCCCCAGGCCCCGGCCGATCGCTACGGCGACCTGCGCCAGGCGGTGTGGCGCCTGG CCGACGAGGGCAAGAGCCCTGTGGAGATCGCCGAGGCTCTTGGCGTGCCCCGGGGCGAGGTGCTGCTGCTGCTCAACCTC AGGGGCAAGAAGGCTCCACGTTAA
Upstream 100 bases:
>100_bases AGGCCTCGTGGCGAGAGTCTGGGGCATAACGGCGGTGCGCACGGGTGCGCTGCCCTGCGCTGCGTGGATGAAACGTGAAA TGCGCCTGAGGGGGTAGCCC
Downstream 100 bases:
>100_bases TATTGGGTGCATTGCGGCGAAAATGGGCCCTAGTTCGTGCAAAGCCATGCTGATTCGCCGCGAACTGGGTTAATCTTCGA GGCGTTTTGAGCCATGTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRMARLNDLAAQLEIRAVAEVQA KARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQPERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAG GSRQAADSGQFASPGQPSQPAEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL RGKKAPR
Sequences:
>Translated_247_residues METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRMARLNDLAAQLEIRAVAEVQA KARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQPERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAG GSRQAADSGQFASPGQPSQPAEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL RGKKAPR >Mature_247_residues METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRMARLNDLAAQLEIRAVAEVQA KARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQPERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAG GSRQAADSGQFASPGQPSQPAEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL RGKKAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26031; Mature: 26031
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLNDLAAQLEIRAVAEVQAKARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAGGSRQAADSGQFASPGQPSQP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEC RGKKAPR CCCCCCC >Mature Secondary Structure METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLNDLAAQLEIRAVAEVQAKARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAGGSRQAADSGQFASPGQPSQP CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEC RGKKAPR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA