Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894119

Identifier: 51894119

GI number: 51894119

Start: 3204151

End: 3204894

Strand: Reverse

Name: 51894119

Synonym: STH2983

Alternate gene names: NA

Gene position: 3204894-3204151 (Counterclockwise)

Preceding gene: 51894120

Following gene: 51894118

Centisome position: 89.87

GC content: 73.79

Gene sequence:

>744_bases
ATGGAGACCTTTCTCTATCTCGTCCTGGCCCTGGCAGCGGTCGGCGCGCTGGCCTACGCCGTTTACCAGGTGACGGTCAG
GCAGCAGCGGATGCTGGCGGAGATCACCCGGCTGGAGCGGCTGACGGCCGAGGTGATCATGAGCGCCGAGGCCCTGCTGG
ATGAGATCGACCAGCGGATGGCGCGGCTCAACGACCTGGCCGCCCAGTTGGAGATCCGGGCGGTCGCCGAGGTGCAGGCG
AAGGCGCGGTCCCGGGCCAAGTCCGGGACGCAGCCGCAGGCGGACGCGCCGCCGGACGGGCGTCCTCCGGCCCCTGCGCC
GCCGGACGCCGGGGACCAGGAAGCGCCTCAGCCGCAACCGGAGCGAGCGCCGGAGGTCGAAGCCGCCCAGCAGAAGCCGA
AGCGAGGCCGGCGGTCCCGCGCCGGGGCCGGGAGCACAGCCGTGCCATCCGGTCCGGCGGCGGGCTCCCAGCAGGCGGGG
GGTTCCCGGCAGGCTGCAGACTCGGGACAATTCGCAAGCCCCGGGCAACCGTCGCAGCCGGCAGAGGCCCCTCCCGCGGA
GCCTTCGCCCGCGGAGCCGGCACGCCCCCAGGCCCCGGCCGATCGCTACGGCGACCTGCGCCAGGCGGTGTGGCGCCTGG
CCGACGAGGGCAAGAGCCCTGTGGAGATCGCCGAGGCTCTTGGCGTGCCCCGGGGCGAGGTGCTGCTGCTGCTCAACCTC
AGGGGCAAGAAGGCTCCACGTTAA

Upstream 100 bases:

>100_bases
AGGCCTCGTGGCGAGAGTCTGGGGCATAACGGCGGTGCGCACGGGTGCGCTGCCCTGCGCTGCGTGGATGAAACGTGAAA
TGCGCCTGAGGGGGTAGCCC

Downstream 100 bases:

>100_bases
TATTGGGTGCATTGCGGCGAAAATGGGCCCTAGTTCGTGCAAAGCCATGCTGATTCGCCGCGAACTGGGTTAATCTTCGA
GGCGTTTTGAGCCATGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRMARLNDLAAQLEIRAVAEVQA
KARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQPERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAG
GSRQAADSGQFASPGQPSQPAEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL
RGKKAPR

Sequences:

>Translated_247_residues
METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRMARLNDLAAQLEIRAVAEVQA
KARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQPERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAG
GSRQAADSGQFASPGQPSQPAEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL
RGKKAPR
>Mature_247_residues
METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRMARLNDLAAQLEIRAVAEVQA
KARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQPERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAG
GSRQAADSGQFASPGQPSQPAEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL
RGKKAPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26031; Mature: 26031

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLNDLAAQLEIRAVAEVQAKARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAGGSRQAADSGQFASPGQPSQP
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEC
RGKKAPR
CCCCCCC
>Mature Secondary Structure
METFLYLVLALAAVGALAYAVYQVTVRQQRMLAEITRLERLTAEVIMSAEALLDEIDQRM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLNDLAAQLEIRAVAEVQAKARSRAKSGTQPQADAPPDGRPPAPAPPDAGDQEAPQPQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ERAPEVEAAQQKPKRGRRSRAGAGSTAVPSGPAAGSQQAGGSRQAADSGQFASPGQPSQP
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AEAPPAEPSPAEPARPQAPADRYGDLRQAVWRLADEGKSPVEIAEALGVPRGEVLLLLNL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEC
RGKKAPR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA