| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is motB
Identifier: 51894108
GI number: 51894108
Start: 3195363
End: 3196265
Strand: Reverse
Name: motB
Synonym: STH2972
Alternate gene names: NA
Gene position: 3196265-3195363 (Counterclockwise)
Preceding gene: 51894109
Following gene: 51894107
Centisome position: 89.63
GC content: 71.76
Gene sequence:
>903_bases ATGGCCGCGATGAACAAGAAGCCGTCCGCGGCGGAGGAGCACGGCGGCGGAGGGCACGGCAGCGGCACGGCCCGCTGGAT GGTCTCCTACGCGGACTTCATGACCCTCATGTTCATCGTGTTCGTGGTCATGTTCTCCTTCGCGCGGGTAGACACGGCCA AGTACCAGAGCCTGGCCCGGTCGCTGGGGCAGGCGCTGGGCACCGTGGGACCTGACATTGCGCCGCTGCCCACGCGCGGC CAGGAGGGCACCGCGCTGCCCATCATCTGGCCCGAGCGGCCGGGGAGCCTGCCGGACGTGCCCGACTGGCCGGCCCACCT CATCGCCCCGCCGGAGGAAGAGCCCACCGAGTCCGCACCGGTCCCGCCGGTGGAGCCGCCCCCTGCGGAGGCGGAACCGG CTGATGAGCCCACCGACGTGTGGACCGTGCTGGAGCCGGAACCGGCCCCGGTCCCGGCGTCCCCCCGGGTCACAGCGCCT GTGGCCGAGCCGGATGAGATGGCAGAGGTGGCCGAGGTCTTCCGGGCCATGCCGGGCGTGAAGACCGGCCTGCTCTCCGT GGCGCTGGAGGAGCGGGGCATCGTCCTCAGCGTGGCCGGCAGCCTGCTCTTCGAGCCTGGCGAGTACACCATCCGGCCCG AGGCGTATCCCACCCTCAACGAGATCGCGGACAAGCTGGCCGGGGTGGAACTTCCCATTATGGTGAACGGCACCGCCGAC GCCAGCCACGCCGCCGGCAGCGCGGAGGCCTTTGAGCTGGCAGCCCTCCGGGCCGGCGCCGTGGTGCGGTACTTCACGGA GACCTACGGCCTGCCCGGCGGCAACTTCGTCTACTTCGGCTACGGCGACGGGCAGTCCGCCTCGGACCGGGTGACCATCG TGGTGGCGCGCAAGGCGCGGTAG
Upstream 100 bases:
>100_bases CGAAACTTGCGGGAGAAGCTCTCCATCTACCTGCCCAGCACCGGCGGCCGGCGTGCCGCGGTGACGGAGGGCGCTCCGGT ACGGGAAGGGGCATAGCGGA
Downstream 100 bases:
>100_bases CGCAAGAGGGTCATGACGTGACCTTCCGTCCCATATCCTCCTATGAGCCCGTCCACGGGCTCGCAAGGGGGAGCCCGCGT TGGAATGGAAGTCCGCCCTC
Product: flagellar motor protein MotB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAAMNKKPSAAEEHGGGGHGSGTARWMVSYADFMTLMFIVFVVMFSFARVDTAKYQSLARSLGQALGTVGPDIAPLPTRG QEGTALPIIWPERPGSLPDVPDWPAHLIAPPEEEPTESAPVPPVEPPPAEAEPADEPTDVWTVLEPEPAPVPASPRVTAP VAEPDEMAEVAEVFRAMPGVKTGLLSVALEERGIVLSVAGSLLFEPGEYTIRPEAYPTLNEIADKLAGVELPIMVNGTAD ASHAAGSAEAFELAALRAGAVVRYFTETYGLPGGNFVYFGYGDGQSASDRVTIVVARKAR
Sequences:
>Translated_300_residues MAAMNKKPSAAEEHGGGGHGSGTARWMVSYADFMTLMFIVFVVMFSFARVDTAKYQSLARSLGQALGTVGPDIAPLPTRG QEGTALPIIWPERPGSLPDVPDWPAHLIAPPEEEPTESAPVPPVEPPPAEAEPADEPTDVWTVLEPEPAPVPASPRVTAP VAEPDEMAEVAEVFRAMPGVKTGLLSVALEERGIVLSVAGSLLFEPGEYTIRPEAYPTLNEIADKLAGVELPIMVNGTAD ASHAAGSAEAFELAALRAGAVVRYFTETYGLPGGNFVYFGYGDGQSASDRVTIVVARKAR >Mature_299_residues AAMNKKPSAAEEHGGGGHGSGTARWMVSYADFMTLMFIVFVVMFSFARVDTAKYQSLARSLGQALGTVGPDIAPLPTRGQ EGTALPIIWPERPGSLPDVPDWPAHLIAPPEEEPTESAPVPPVEPPPAEAEPADEPTDVWTVLEPEPAPVPASPRVTAPV AEPDEMAEVAEVFRAMPGVKTGLLSVALEERGIVLSVAGSLLFEPGEYTIRPEAYPTLNEIADKLAGVELPIMVNGTADA SHAAGSAEAFELAALRAGAVVRYFTETYGLPGGNFVYFGYGDGQSASDRVTIVVARKAR
Specific function: Unknown
COG id: COG1360
COG function: function code N; Flagellar motor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31632; Mature: 31501
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMNKKPSAAEEHGGGGHGSGTARWMVSYADFMTLMFIVFVVMFSFARVDTAKYQSLAR CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGQALGTVGPDIAPLPTRGQEGTALPIIWPERPGSLPDVPDWPAHLIAPPEEEPTESAP HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPVEPPPAEAEPADEPTDVWTVLEPEPAPVPASPRVTAPVAEPDEMAEVAEVFRAMPGV CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCH KTGLLSVALEERGIVLSVAGSLLFEPGEYTIRPEAYPTLNEIADKLAGVELPIMVNGTAD HHHHHHHHHHCCCEEEEECCHHEECCCCEEECCCCCCCHHHHHHHHCCCCCEEEEECCCC ASHAAGSAEAFELAALRAGAVVRYFTETYGLPGGNFVYFGYGDGQSASDRVTIVVARKAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEEECCC >Mature Secondary Structure AAMNKKPSAAEEHGGGGHGSGTARWMVSYADFMTLMFIVFVVMFSFARVDTAKYQSLAR CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGQALGTVGPDIAPLPTRGQEGTALPIIWPERPGSLPDVPDWPAHLIAPPEEEPTESAP HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VPPVEPPPAEAEPADEPTDVWTVLEPEPAPVPASPRVTAPVAEPDEMAEVAEVFRAMPGV CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCH KTGLLSVALEERGIVLSVAGSLLFEPGEYTIRPEAYPTLNEIADKLAGVELPIMVNGTAD HHHHHHHHHHCCCEEEEECCHHEECCCCEEECCCCCCCHHHHHHHHCCCCCEEEEECCCC ASHAAGSAEAFELAALRAGAVVRYFTETYGLPGGNFVYFGYGDGQSASDRVTIVVARKAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA