Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51894107

Identifier: 51894107

GI number: 51894107

Start: 3195005

End: 3195283

Strand: Reverse

Name: 51894107

Synonym: STH2971

Alternate gene names: NA

Gene position: 3195283-3195005 (Counterclockwise)

Preceding gene: 51894108

Following gene: 51894106

Centisome position: 89.6

GC content: 64.87

Gene sequence:

>279_bases
TTGGAATGGAAGTCCGCCCTCGTGACCTTCGCCATCATCTTCCTCGCCGAGCTCGGCGACAAGACCCAGCTGATGGTCAT
GTCCCTGTCCGCCCGGTCCAAGGCCCCGCACATGATCTTCCTCGGCGCGGCCGGGGCGCTGATCGCGTCCTCCCTGGTCG
CCGTGGTGGCGGGCGACAGCTTTCTCCGCCACATCCCCGTCCGGTATCTCCGCCTGGGTACCGGTGCGATGTTCATGATG
ATCGGCGCCATGCTGGTCTACCGTTCCCTACGCAGTTGA

Upstream 100 bases:

>100_bases
GTGGCGCGCAAGGCGCGGTAGCGCAAGAGGGTCATGACGTGACCTTCCGTCCCATATCCTCCTATGAGCCCGTCCACGGG
CTCGCAAGGGGGAGCCCGCG

Downstream 100 bases:

>100_bases
TCGGCCGTCCCCCCGGGGACGGCCTTTCTTGTTTACACAGTTTTCACTTCCCCGGCGAACCTCCCCAGCCTCCCCGGCGT
CTCCCTAACAAAGGGGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MEWKSALVTFAIIFLAELGDKTQLMVMSLSARSKAPHMIFLGAAGALIASSLVAVVAGDSFLRHIPVRYLRLGTGAMFMM
IGAMLVYRSLRS

Sequences:

>Translated_92_residues
MEWKSALVTFAIIFLAELGDKTQLMVMSLSARSKAPHMIFLGAAGALIASSLVAVVAGDSFLRHIPVRYLRLGTGAMFMM
IGAMLVYRSLRS
>Mature_92_residues
MEWKSALVTFAIIFLAELGDKTQLMVMSLSARSKAPHMIFLGAAGALIASSLVAVVAGDSFLRHIPVRYLRLGTGAMFMM
IGAMLVYRSLRS

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9977; Mature: 9977

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.7 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.7 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWKSALVTFAIIFLAELGDKTQLMVMSLSARSKAPHMIFLGAAGALIASSLVAVVAGDS
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHCCH
FLRHIPVRYLRLGTGAMFMMIGAMLVYRSLRS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEWKSALVTFAIIFLAELGDKTQLMVMSLSARSKAPHMIFLGAAGALIASSLVAVVAGDS
CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHCCH
FLRHIPVRYLRLGTGAMFMMIGAMLVYRSLRS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA