Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894103

Identifier: 51894103

GI number: 51894103

Start: 3189654

End: 3190544

Strand: Reverse

Name: 51894103

Synonym: STH2967

Alternate gene names: NA

Gene position: 3190544-3189654 (Counterclockwise)

Preceding gene: 51894104

Following gene: 51894101

Centisome position: 89.47

GC content: 73.4

Gene sequence:

>891_bases
GTGACCGGATCCGTGGCGCAGCCGATCCCTCTGCACGAGCGGCACTTCAGCGCCCTTGCCCTGCGGCTCTACGCGGAATG
CCCCCTGCGCTTCCGCCGGCGGTACGTCGACGGGCTCGCCATTCCCGGCCTGCCCGATGACCCGGAGGAGCGGCGGGCGA
TGCTGCAGGGCGAGCGCTTCCACCTGATGGCCCGGCGGTACTACAGCGGCCTGGAGCCGGGCACCCTGGGCGCCCCCGCC
GACCGGGCGGAGCTGGAGGACTGGATGCAGAAGCTGGTGCGCTACCTCCCCCGGCGTCCGGGGTACGCCTATTACCCCGA
GCTGGAGCTGCGGCTGTCCGAGCCGGCGCTGCGGCTGGTGGCCAGGTTCGACCTGGTGGTCGTGGCGCCCGACGGGGAGG
CGACAATCTACGACTGGAAGACCCTGCGCCACATGCCGCCCCGGGCGAAGCTGGAGGCCGCCTTTCAGACGACGGTCTAC
CGCTATGTGCTCTGCGCGGCCGGCGGCGCTTACGCTCCCGGCGGCGCGTTCGACCCCGACCGGGTGTCGATGGTCTACTG
GAACCCGCTGCGAGGGGGGCGGGAGGAGCGGCTGCCGTACAGCGCGGCCCGGTTCCGGGAGGACGGCCGGCGGCTGCGGC
AGCTGGTGGCGCAGATCCTGGCCACGCCGCCGGACGGGTTTCCGCCCACGGGGGATCCGCGCCTCTGCGCCCGGTGCGAG
TACCGGCAGCTCTGTCACGGGCCGCTCGCGGACAGGCCGCTGCCTGAACCTGGCGACGGTTGGCCGGAGGCGGCTCTGGA
GCCAGGCCAGGAAGTACCCGTGGAAGATGAGGAGCCGGCGGGCGCGTTCGACGCGGATCCGGACGGGCTCGCGGGCCTGC
CGCTGCCCTAA

Upstream 100 bases:

>100_bases
GCAACCTCCTGCTCTCCTATCACTGGCGCAACGAGCGGGGATACGACACCGCTCCCCCGCCGGCGGTGGTGCGGCTTCGG
CAGTTCGTCCAGGCGAGGAG

Downstream 100 bases:

>100_bases
CCGGGGAGAACCGGCCCCGGCCCGGCCGAGGTGAACCGGCGTGTGGCCCGGGGTTCACCGCCGGGGAAGGGTTTCAGCAA
TTCTCAGGGCTGTCCCGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MTGSVAQPIPLHERHFSALALRLYAECPLRFRRRYVDGLAIPGLPDDPEERRAMLQGERFHLMARRYYSGLEPGTLGAPA
DRAELEDWMQKLVRYLPRRPGYAYYPELELRLSEPALRLVARFDLVVVAPDGEATIYDWKTLRHMPPRAKLEAAFQTTVY
RYVLCAAGGAYAPGGAFDPDRVSMVYWNPLRGGREERLPYSAARFREDGRRLRQLVAQILATPPDGFPPTGDPRLCARCE
YRQLCHGPLADRPLPEPGDGWPEAALEPGQEVPVEDEEPAGAFDADPDGLAGLPLP

Sequences:

>Translated_296_residues
MTGSVAQPIPLHERHFSALALRLYAECPLRFRRRYVDGLAIPGLPDDPEERRAMLQGERFHLMARRYYSGLEPGTLGAPA
DRAELEDWMQKLVRYLPRRPGYAYYPELELRLSEPALRLVARFDLVVVAPDGEATIYDWKTLRHMPPRAKLEAAFQTTVY
RYVLCAAGGAYAPGGAFDPDRVSMVYWNPLRGGREERLPYSAARFREDGRRLRQLVAQILATPPDGFPPTGDPRLCARCE
YRQLCHGPLADRPLPEPGDGWPEAALEPGQEVPVEDEEPAGAFDADPDGLAGLPLP
>Mature_295_residues
TGSVAQPIPLHERHFSALALRLYAECPLRFRRRYVDGLAIPGLPDDPEERRAMLQGERFHLMARRYYSGLEPGTLGAPAD
RAELEDWMQKLVRYLPRRPGYAYYPELELRLSEPALRLVARFDLVVVAPDGEATIYDWKTLRHMPPRAKLEAAFQTTVYR
YVLCAAGGAYAPGGAFDPDRVSMVYWNPLRGGREERLPYSAARFREDGRRLRQLVAQILATPPDGFPPTGDPRLCARCEY
RQLCHGPLADRPLPEPGDGWPEAALEPGQEVPVEDEEPAGAFDADPDGLAGLPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33202; Mature: 33071

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSVAQPIPLHERHFSALALRLYAECPLRFRRRYVDGLAIPGLPDDPEERRAMLQGERF
CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHH
HLMARRYYSGLEPGTLGAPADRAELEDWMQKLVRYLPRRPGYAYYPELELRLSEPALRLV
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHHHHHH
ARFDLVVVAPDGEATIYDWKTLRHMPPRAKLEAAFQTTVYRYVLCAAGGAYAPGGAFDPD
HHHCEEEECCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RVSMVYWNPLRGGREERLPYSAARFREDGRRLRQLVAQILATPPDGFPPTGDPRLCARCE
CEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
YRQLCHGPLADRPLPEPGDGWPEAALEPGQEVPVEDEEPAGAFDADPDGLAGLPLP
HHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGSVAQPIPLHERHFSALALRLYAECPLRFRRRYVDGLAIPGLPDDPEERRAMLQGERF
CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHH
HLMARRYYSGLEPGTLGAPADRAELEDWMQKLVRYLPRRPGYAYYPELELRLSEPALRLV
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCEEEEECCHHHHHH
ARFDLVVVAPDGEATIYDWKTLRHMPPRAKLEAAFQTTVYRYVLCAAGGAYAPGGAFDPD
HHHCEEEECCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
RVSMVYWNPLRGGREERLPYSAARFREDGRRLRQLVAQILATPPDGFPPTGDPRLCARCE
CEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
YRQLCHGPLADRPLPEPGDGWPEAALEPGQEVPVEDEEPAGAFDADPDGLAGLPLP
HHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA