| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51894091
Identifier: 51894091
GI number: 51894091
Start: 3179228
End: 3179662
Strand: Reverse
Name: 51894091
Synonym: STH2955
Alternate gene names: NA
Gene position: 3179662-3179228 (Counterclockwise)
Preceding gene: 51894092
Following gene: 51894090
Centisome position: 89.16
GC content: 69.43
Gene sequence:
>435_bases GTGGAAGGACAGGAGTTGTTCGCAGGCGGAGGGGAGCCCGTCGTCTACCTGCCCACGGAGGCGGGGACCGCCATCGCCCC CGACGGCCGCAAGCTGGTCTTCTTCAGCGTGCCGGCCCTGGATGTGATGATCAAGCAGGTCCTGGCGGCGCAGCCCCGGG AGTACACCTACCGCTGGGGCTACCACCCCGGGGAGCGGCTGCACGTGCTGCTGTTCGGCTGGCCCACCGGCCACGGCGCG GGACTGGCCATCCCGGAGGGCGTGGGCGACGCGATCCTCAACTTCATGCAGGGCACCACGGACGTCTACATCACCGCGGC GCCCGTGGGCGACAAGCTGCGCGGCCCCGTGACGCCTGAGGTCATTGACGAGCTGCGCTTCGGCATGACCGTGTACCTGC CCGAGGTGAAGTTCAAGCCGGAGGGCTGGACCTGA
Upstream 100 bases:
>100_bases GTGGCTGGTGGGCTACCTGGCCGGGTTCTCGGGGGAGCCCGAGACGTTCCTGAAGCCTTAGGCCTCAGGGCGTGCCACAA CGGAGAAAGAAGGTTGACCC
Downstream 100 bases:
>100_bases GATGGTCCCCCGGTGGGCGGGCACGGTGTTGCAGGACAGCCTGGGCCTGCGGCCGGGCGAGCGGGTGCTGGTTCTGGCGG ACAGGCCGCTGGCGCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MEGQELFAGGGEPVVYLPTEAGTAIAPDGRKLVFFSVPALDVMIKQVLAAQPREYTYRWGYHPGERLHVLLFGWPTGHGA GLAIPEGVGDAILNFMQGTTDVYITAAPVGDKLRGPVTPEVIDELRFGMTVYLPEVKFKPEGWT
Sequences:
>Translated_144_residues MEGQELFAGGGEPVVYLPTEAGTAIAPDGRKLVFFSVPALDVMIKQVLAAQPREYTYRWGYHPGERLHVLLFGWPTGHGA GLAIPEGVGDAILNFMQGTTDVYITAAPVGDKLRGPVTPEVIDELRFGMTVYLPEVKFKPEGWT >Mature_144_residues MEGQELFAGGGEPVVYLPTEAGTAIAPDGRKLVFFSVPALDVMIKQVLAAQPREYTYRWGYHPGERLHVLLFGWPTGHGA GLAIPEGVGDAILNFMQGTTDVYITAAPVGDKLRGPVTPEVIDELRFGMTVYLPEVKFKPEGWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15673; Mature: 15673
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGQELFAGGGEPVVYLPTEAGTAIAPDGRKLVFFSVPALDVMIKQVLAAQPREYTYRWG CCCCEEECCCCCCEEEEECCCCCEECCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECC YHPGERLHVLLFGWPTGHGAGLAIPEGVGDAILNFMQGTTDVYITAAPVGDKLRGPVTPE CCCCCEEEEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHH VIDELRFGMTVYLPEVKFKPEGWT HHHHHHCCEEEEECCEEECCCCCC >Mature Secondary Structure MEGQELFAGGGEPVVYLPTEAGTAIAPDGRKLVFFSVPALDVMIKQVLAAQPREYTYRWG CCCCEEECCCCCCEEEEECCCCCEECCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEECC YHPGERLHVLLFGWPTGHGAGLAIPEGVGDAILNFMQGTTDVYITAAPVGDKLRGPVTPE CCCCCEEEEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHH VIDELRFGMTVYLPEVKFKPEGWT HHHHHHCCEEEEECCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA