| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894090
Identifier: 51894090
GI number: 51894090
Start: 3178300
End: 3179226
Strand: Reverse
Name: 51894090
Synonym: STH2954
Alternate gene names: NA
Gene position: 3179226-3178300 (Counterclockwise)
Preceding gene: 51894091
Following gene: 51894089
Centisome position: 89.15
GC content: 76.27
Gene sequence:
>927_bases ATGGTCCCCCGGTGGGCGGGCACGGTGTTGCAGGACAGCCTGGGCCTGCGGCCGGGCGAGCGGGTGCTGGTTCTGGCGGA CAGGCCGCTGGCGCCGGCCGCCGCGGCGCTGGACGAGGCGGCCCGGGCGCTGGGGGCGGCCGAGGTGAAGGCGCATCTCC TGCCCGACCCTGATCGGCTGCAGGTCGTTCCCCGGTGGATCACGGACGCGGTGAGATCGGCGGACGCAATCGTCTCGCTG CGGGCGGCCCTCAGGCTCGCCGCGGAGGACGCGCTGATGCGGGCCGCGCTGGACGCCTTCCACCGGGCGCGGCGCGGCCG CTGGGTGTCGATGGCCCAGGTGGACGTGTCGGTCCTGGAGACCGCGCTGGCCCCTGGTCTGGCCGAGGCCGCCGCCCGTG CCCGGGCCCTCGCCGCGCGCCTCCGGGCCGCGGCAGGCGTGCGGCTCACCGCCCCGGGGGGCACGGACCTTCAGCTCACC TTCGCAGGCCGGCCCGTCCACGCCGATACCGGCTGGGTCAGGCAGCCCGGGGACTTCGGCAACCTGCCGGCCGGCGAGGC CTACGTCGCTCCCGACGAGACCGGGGCGGAGGGCCTGCTGGTGGTGGACGTCGCACTGGGCGACATCCCGCTGGACCGGC CGGTCGCCCTCCGGTTCCGGCGGGGCCGCGTGGCGGAGGTGACGGGCGGGGAGGCCGCGGCGGAGCTGCGCAGGCGGCTG GGAAACGACCCGTGGGCGTGGACCGTCGGCGAGCTGGGGCTGGGAACCAATCCCCACGTGCGGCCGTGCGGCCGCGTCGC CGTGGCCGAGAAGGCCCTGGGGACGGCCCATGTCGCTTTGGGCGGCAACCTGGCCTTCGGCGGAAGGAACCCCGCTTCCA CCCACTACGACTGCGTCATCGCTGCCGCTGACGTGCGTTTCCTGTGA
Upstream 100 bases:
>100_bases CTGCGCGGCCCCGTGACGCCTGAGGTCATTGACGAGCTGCGCTTCGGCATGACCGTGTACCTGCCCGAGGTGAAGTTCAA GCCGGAGGGCTGGACCTGAG
Downstream 100 bases:
>100_bases CGAAAGCCAAAGGGCCTGCCCCACAGGGGGCAGGCCCTTTTCCGTGTGCCCGGCATGGGCGCTGACTTGGCGGTGAAAGT CCGCTACGGGCGAGGCAGCA
Product: putative aminopeptidase
Products: NA
Alternate protein names: Leucyl Aminopeptidase; Leucyl Aminopeptidase-Like Protein; Peptidase; Aminopeptidase T; Aminopeptidase-Like Protein
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MVPRWAGTVLQDSLGLRPGERVLVLADRPLAPAAAALDEAARALGAAEVKAHLLPDPDRLQVVPRWITDAVRSADAIVSL RAALRLAAEDALMRAALDAFHRARRGRWVSMAQVDVSVLETALAPGLAEAAARARALAARLRAAAGVRLTAPGGTDLQLT FAGRPVHADTGWVRQPGDFGNLPAGEAYVAPDETGAEGLLVVDVALGDIPLDRPVALRFRRGRVAEVTGGEAAAELRRRL GNDPWAWTVGELGLGTNPHVRPCGRVAVAEKALGTAHVALGGNLAFGGRNPASTHYDCVIAAADVRFL
Sequences:
>Translated_308_residues MVPRWAGTVLQDSLGLRPGERVLVLADRPLAPAAAALDEAARALGAAEVKAHLLPDPDRLQVVPRWITDAVRSADAIVSL RAALRLAAEDALMRAALDAFHRARRGRWVSMAQVDVSVLETALAPGLAEAAARARALAARLRAAAGVRLTAPGGTDLQLT FAGRPVHADTGWVRQPGDFGNLPAGEAYVAPDETGAEGLLVVDVALGDIPLDRPVALRFRRGRVAEVTGGEAAAELRRRL GNDPWAWTVGELGLGTNPHVRPCGRVAVAEKALGTAHVALGGNLAFGGRNPASTHYDCVIAAADVRFL >Mature_308_residues MVPRWAGTVLQDSLGLRPGERVLVLADRPLAPAAAALDEAARALGAAEVKAHLLPDPDRLQVVPRWITDAVRSADAIVSL RAALRLAAEDALMRAALDAFHRARRGRWVSMAQVDVSVLETALAPGLAEAAARARALAARLRAAAGVRLTAPGGTDLQLT FAGRPVHADTGWVRQPGDFGNLPAGEAYVAPDETGAEGLLVVDVALGDIPLDRPVALRFRRGRVAEVTGGEAAAELRRRL GNDPWAWTVGELGLGTNPHVRPCGRVAVAEKALGTAHVALGGNLAFGGRNPASTHYDCVIAAADVRFL
Specific function: Unknown
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32253; Mature: 32253
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPRWAGTVLQDSLGLRPGERVLVLADRPLAPAAAALDEAARALGAAEVKAHLLPDPDRL CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QVVPRWITDAVRSADAIVSLRAALRLAAEDALMRAALDAFHRARRGRWVSMAQVDVSVLE EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH TALAPGLAEAAARARALAARLRAAAGVRLTAPGGTDLQLTFAGRPVHADTGWVRQPGDFG HHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCC NLPAGEAYVAPDETGAEGLLVVDVALGDIPLDRPVALRFRRGRVAEVTGGEAAAELRRRL CCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHH GNDPWAWTVGELGLGTNPHVRPCGRVAVAEKALGTAHVALGGNLAFGGRNPASTHYDCVI CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCEEEE AAADVRFL EECCEECC >Mature Secondary Structure MVPRWAGTVLQDSLGLRPGERVLVLADRPLAPAAAALDEAARALGAAEVKAHLLPDPDRL CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QVVPRWITDAVRSADAIVSLRAALRLAAEDALMRAALDAFHRARRGRWVSMAQVDVSVLE EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH TALAPGLAEAAARARALAARLRAAAGVRLTAPGGTDLQLTFAGRPVHADTGWVRQPGDFG HHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCC NLPAGEAYVAPDETGAEGLLVVDVALGDIPLDRPVALRFRRGRVAEVTGGEAAAELRRRL CCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHH GNDPWAWTVGELGLGTNPHVRPCGRVAVAEKALGTAHVALGGNLAFGGRNPASTHYDCVI CCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCEEEECCCCCCCCCCEEEE AAADVRFL EECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA