| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51894075
Identifier: 51894075
GI number: 51894075
Start: 3164038
End: 3164310
Strand: Reverse
Name: 51894075
Synonym: STH2939
Alternate gene names: NA
Gene position: 3164310-3164038 (Counterclockwise)
Preceding gene: 51894076
Following gene: 51894074
Centisome position: 88.73
GC content: 73.63
Gene sequence:
>273_bases TTGGAGAAACCTACCGGGAAGTTGTGCTCGGCAGGAGGGGTGGCCGTGCGGTCGCGCCTTTTCGCCCCGGGCCGGCGGCT GGTGGCCGAAGTCGTCTCCGTCTATCTCGACCGCGCCGTCCTCGCCTTCGGGGACGGCGTCCGCATCGAGGTCGCGGCGC GGGCGCCGCTCCGGGAGGGCGAGCGGGTCATCCTCCGGGTGGAGCGCGCCAGGAACGGTGCCGTCGTGCTCCGCCTGGCG GGGGACGAGGCCGGGCTGGATCGCCTGGTCTAG
Upstream 100 bases:
>100_bases GTACGAGTACCTGGACCTGGCCGACCTCATCTCCTTCGCCCGGGAGTGAACCCACCGCTGCGCCGGATCGCCGCTCCGGA TGAAGGGGATCGCTGCCGCA
Downstream 100 bases:
>100_bases GTCCCGGGGAGATGGGGCACGCGGGCTTCAGACAGGTGGAAAGGGGTGGCTCGGCGTGATCCTGGGCACCGGCGTCGACA TCGTGGCGGTGGAGCGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MEKPTGKLCSAGGVAVRSRLFAPGRRLVAEVVSVYLDRAVLAFGDGVRIEVAARAPLREGERVILRVERARNGAVVLRLA GDEAGLDRLV
Sequences:
>Translated_90_residues MEKPTGKLCSAGGVAVRSRLFAPGRRLVAEVVSVYLDRAVLAFGDGVRIEVAARAPLREGERVILRVERARNGAVVLRLA GDEAGLDRLV >Mature_90_residues MEKPTGKLCSAGGVAVRSRLFAPGRRLVAEVVSVYLDRAVLAFGDGVRIEVAARAPLREGERVILRVERARNGAVVLRLA GDEAGLDRLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9638; Mature: 9638
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKPTGKLCSAGGVAVRSRLFAPGRRLVAEVVSVYLDRAVLAFGDGVRIEVAARAPLREG CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCC ERVILRVERARNGAVVLRLAGDEAGLDRLV CEEEEEEECCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MEKPTGKLCSAGGVAVRSRLFAPGRRLVAEVVSVYLDRAVLAFGDGVRIEVAARAPLREG CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCC ERVILRVERARNGAVVLRLAGDEAGLDRLV CEEEEEEECCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA