| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is acpS
Identifier: 51894074
GI number: 51894074
Start: 3163605
End: 3163982
Strand: Reverse
Name: acpS
Synonym: STH2938
Alternate gene names: 51894074
Gene position: 3163982-3163605 (Counterclockwise)
Preceding gene: 51894075
Following gene: 51894073
Centisome position: 88.72
GC content: 72.75
Gene sequence:
>378_bases GTGATCCTGGGCACCGGCGTCGACATCGTGGCGGTGGAGCGGGTGGCGCGCGCCGTCGAACGCCACGGGGACCGGTTCCT CCGGCGCGTCTTCACCCCGGGGGAGCTCGCCTACTGCACATCCAGCGAAGCGCACCGGGCGGCGCGCCTCGCGGCCCGGT TCGCCGCGAAGGAGGCGGTGCTGAAGGCCCTGGGGATCGGGCTGCGGGAGGTGCGCTGGACCGACGCGGAGGTCTGCCGC GACGAACGCGGCCGCCCGTCGGTGCGGCTTACGGGCCGGCTCGCCGAGATCGCCGCCGCGCGGGGCGCAACTCGCATTCA TCTTTCCCTGTCCCATACACAGGAGTACGCGGTGGCACAGGTGGTGATCGAGGGATGA
Upstream 100 bases:
>100_bases CTCCGCCTGGCGGGGGACGAGGCCGGGCTGGATCGCCTGGTCTAGGTCCCGGGGAGATGGGGCACGCGGGCTTCAGACAG GTGGAAAGGGGTGGCTCGGC
Downstream 100 bases:
>100_bases AGGTCGTTTCCGGCGAGCAGATGCGGGCGATTGAGGCGCGCCTTTTCGATCAGTACGGCTTCACCTCCGCGATCTTGATG GAGCTGGCGGGGCGGCAGGT
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MILGTGVDIVAVERVARAVERHGDRFLRRVFTPGELAYCTSSEAHRAARLAARFAAKEAVLKALGIGLREVRWTDAEVCR DERGRPSVRLTGRLAEIAAARGATRIHLSLSHTQEYAVAQVVIEG
Sequences:
>Translated_125_residues MILGTGVDIVAVERVARAVERHGDRFLRRVFTPGELAYCTSSEAHRAARLAARFAAKEAVLKALGIGLREVRWTDAEVCR DERGRPSVRLTGRLAEIAAARGATRIHLSLSHTQEYAVAQVVIEG >Mature_125_residues MILGTGVDIVAVERVARAVERHGDRFLRRVFTPGELAYCTSSEAHRAARLAARFAAKEAVLKALGIGLREVRWTDAEVCR DERGRPSVRLTGRLAEIAAARGATRIHLSLSHTQEYAVAQVVIEG
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family
Homologues:
Organism=Escherichia coli, GI1788916, Length=125, Percent_Identity=40.8, Blast_Score=85, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6325025, Length=123, Percent_Identity=32.520325203252, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPS_SYMTH (Q67K77)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076765.1 - ProteinModelPortal: Q67K77 - SMR: Q67K77 - GeneID: 2981705 - GenomeReviews: AP006840_GR - KEGG: sth:STH2938 - NMPDR: fig|292459.1.peg.2812 - HOGENOM: HBG734479 - OMA: QGVFWRD - ProtClustDB: PRK14660 - BioCyc: STHE292459:STH2938-MONOMER - BRENDA: 2.7.8.7 - GO: GO:0005737 - HAMAP: MF_00101 - InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 - TIGRFAMs: TIGR00516 - TIGRFAMs: TIGR00556
Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf
EC number: =2.7.8.7
Molecular weight: Translated: 13676; Mature: 13676
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGTGVDIVAVERVARAVERHGDRFLRRVFTPGELAYCTSSEAHRAARLAARFAAKEAV CEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH LKALGIGLREVRWTDAEVCRDERGRPSVRLTGRLAEIAAARGATRIHLSLSHTQEYAVAQ HHHHCCCHHHHCCCCHHHHHCCCCCCCEEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHE VVIEG EEECC >Mature Secondary Structure MILGTGVDIVAVERVARAVERHGDRFLRRVFTPGELAYCTSSEAHRAARLAARFAAKEAV CEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH LKALGIGLREVRWTDAEVCRDERGRPSVRLTGRLAEIAAARGATRIHLSLSHTQEYAVAQ HHHHCCCHHHHCCCCHHHHHCCCCCCCEEEHHHHHHHHHHCCCEEEEEEECCCHHHHHHE VVIEG EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA