| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894066
Identifier: 51894066
GI number: 51894066
Start: 3158065
End: 3158646
Strand: Reverse
Name: 51894066
Synonym: STH2930
Alternate gene names: NA
Gene position: 3158646-3158065 (Counterclockwise)
Preceding gene: 51894068
Following gene: 51894065
Centisome position: 88.57
GC content: 67.18
Gene sequence:
>582_bases ATGAAGCTCATGGAGCAGGAGTTCGCGGACATCCGCGGCCGGCTTTACCCCCTGATGATGGATCCGGTGCAGATCCAGGC CAAGGGCGGGGGGCAGATGGTGAACGGCCAGATCGCCGAGGGGCTCTATGTCATCTACGGCATTGAGGAGCCGGGCGACA AGATCCGGTACGTCACGTACCAGGACCTGCGCGACTGGGGCGTGAGCCACACCACCGTCCACATCACCGCCGTCCAGAAC CTGAAGCGGCTGACCGAGGGGAAGCGGGTGACGAAGCTCGACTCGGCGGAGGGCGGCCGGCCGATGTTCATCTGGGCGCT GGCGGACGGCTACGACGCCGCCCGGATCCTGCTCACCGAGTGGCTGCAGGATTTCGCCGAGGCGGTGCCGGGCCGGTTGG TGCTCGGGGTGCCCCACCGGAACTGGCTGGTGGCCGTCGGCGACGCCGATGAGGAGCTGCTGAAGGTGGTGGCGCGGCGG GTGGCCCACGAGCACCGTCACGCCGGGTTCCCCGTGAGCCCGTACCTGTACACCTTTGATGGAGAAAGGATCGTGCGCTA TGTCCGCAGGCAAGGGGAGTGA
Upstream 100 bases:
>100_bases GGTCACCTCCATCGCGCTATCGGAAAGTATCGACCACGGCCGGGCGGTCTAAACTCCCCGTCCGGCTGCCGGGCCGGCAG GGCCCCGGGAGGGATGCACG
Downstream 100 bases:
>100_bases GGCCGGGTTCCTCCGGCAGCTGGCGGAGGCCATCCGCCACCACGGCGGCCCGGCCTACGACGCCCAGCGGGCCCGGTCGC TGGCCGAGGCGGTGTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTYQDLRDWGVSHTTVHITAVQN LKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTEWLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARR VAHEHRHAGFPVSPYLYTFDGERIVRYVRRQGE
Sequences:
>Translated_193_residues MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTYQDLRDWGVSHTTVHITAVQN LKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTEWLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARR VAHEHRHAGFPVSPYLYTFDGERIVRYVRRQGE >Mature_193_residues MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTYQDLRDWGVSHTTVHITAVQN LKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTEWLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARR VAHEHRHAGFPVSPYLYTFDGERIVRYVRRQGE
Specific function: Unknown
COG id: COG4848
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21934; Mature: 21934
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTY CCCHHHHHHHHHCEEEEEEECCEEEEECCCCEEECCEECCCEEEEEEECCCCCCEEEEEH QDLRDWGVSHTTVHITAVQNLKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTE HHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHH WLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARRVAHEHRHAGFPVSPYLYTFD HHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC GERIVRYVRRQGE HHHHHHHHHHCCC >Mature Secondary Structure MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTY CCCHHHHHHHHHCEEEEEEECCEEEEECCCCEEECCEECCCEEEEEEECCCCCCEEEEEH QDLRDWGVSHTTVHITAVQNLKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTE HHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHH WLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARRVAHEHRHAGFPVSPYLYTFD HHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC GERIVRYVRRQGE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA