Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894066

Identifier: 51894066

GI number: 51894066

Start: 3158065

End: 3158646

Strand: Reverse

Name: 51894066

Synonym: STH2930

Alternate gene names: NA

Gene position: 3158646-3158065 (Counterclockwise)

Preceding gene: 51894068

Following gene: 51894065

Centisome position: 88.57

GC content: 67.18

Gene sequence:

>582_bases
ATGAAGCTCATGGAGCAGGAGTTCGCGGACATCCGCGGCCGGCTTTACCCCCTGATGATGGATCCGGTGCAGATCCAGGC
CAAGGGCGGGGGGCAGATGGTGAACGGCCAGATCGCCGAGGGGCTCTATGTCATCTACGGCATTGAGGAGCCGGGCGACA
AGATCCGGTACGTCACGTACCAGGACCTGCGCGACTGGGGCGTGAGCCACACCACCGTCCACATCACCGCCGTCCAGAAC
CTGAAGCGGCTGACCGAGGGGAAGCGGGTGACGAAGCTCGACTCGGCGGAGGGCGGCCGGCCGATGTTCATCTGGGCGCT
GGCGGACGGCTACGACGCCGCCCGGATCCTGCTCACCGAGTGGCTGCAGGATTTCGCCGAGGCGGTGCCGGGCCGGTTGG
TGCTCGGGGTGCCCCACCGGAACTGGCTGGTGGCCGTCGGCGACGCCGATGAGGAGCTGCTGAAGGTGGTGGCGCGGCGG
GTGGCCCACGAGCACCGTCACGCCGGGTTCCCCGTGAGCCCGTACCTGTACACCTTTGATGGAGAAAGGATCGTGCGCTA
TGTCCGCAGGCAAGGGGAGTGA

Upstream 100 bases:

>100_bases
GGTCACCTCCATCGCGCTATCGGAAAGTATCGACCACGGCCGGGCGGTCTAAACTCCCCGTCCGGCTGCCGGGCCGGCAG
GGCCCCGGGAGGGATGCACG

Downstream 100 bases:

>100_bases
GGCCGGGTTCCTCCGGCAGCTGGCGGAGGCCATCCGCCACCACGGCGGCCCGGCCTACGACGCCCAGCGGGCCCGGTCGC
TGGCCGAGGCGGTGTGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTYQDLRDWGVSHTTVHITAVQN
LKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTEWLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARR
VAHEHRHAGFPVSPYLYTFDGERIVRYVRRQGE

Sequences:

>Translated_193_residues
MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTYQDLRDWGVSHTTVHITAVQN
LKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTEWLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARR
VAHEHRHAGFPVSPYLYTFDGERIVRYVRRQGE
>Mature_193_residues
MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTYQDLRDWGVSHTTVHITAVQN
LKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTEWLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARR
VAHEHRHAGFPVSPYLYTFDGERIVRYVRRQGE

Specific function: Unknown

COG id: COG4848

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21934; Mature: 21934

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTY
CCCHHHHHHHHHCEEEEEEECCEEEEECCCCEEECCEECCCEEEEEEECCCCCCEEEEEH
QDLRDWGVSHTTVHITAVQNLKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTE
HHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHH
WLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARRVAHEHRHAGFPVSPYLYTFD
HHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GERIVRYVRRQGE
HHHHHHHHHHCCC
>Mature Secondary Structure
MKLMEQEFADIRGRLYPLMMDPVQIQAKGGGQMVNGQIAEGLYVIYGIEEPGDKIRYVTY
CCCHHHHHHHHHCEEEEEEECCEEEEECCCCEEECCEECCCEEEEEEECCCCCCEEEEEH
QDLRDWGVSHTTVHITAVQNLKRLTEGKRVTKLDSAEGGRPMFIWALADGYDAARILLTE
HHHHHCCCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHH
WLQDFAEAVPGRLVLGVPHRNWLVAVGDADEELLKVVARRVAHEHRHAGFPVSPYLYTFD
HHHHHHHHCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GERIVRYVRRQGE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA