| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894065
Identifier: 51894065
GI number: 51894065
Start: 3157776
End: 3158087
Strand: Reverse
Name: 51894065
Synonym: STH2929
Alternate gene names: NA
Gene position: 3158087-3157776 (Counterclockwise)
Preceding gene: 51894066
Following gene: 51894064
Centisome position: 88.56
GC content: 70.83
Gene sequence:
>312_bases ATGTCCGCAGGCAAGGGGAGTGAGGCCGGGTTCCTCCGGCAGCTGGCGGAGGCCATCCGCCACCACGGCGGCCCGGCCTA CGACGCCCAGCGGGCCCGGTCGCTGGCCGAGGCGGTGTGGCGCGATCTCGGTCACCGGGCGCCCGACGACTTCCCGCACC TGGTGCAGGAGGGTGACCTGCGGTTCGTCTGCCAGTGGTACGAGCAGCCGCCGATCATGACCGTGATGGTGTGGGACGGG GAGATGTGGCGAGACATGGAGCGGCTTCTCCTGCCCGGTGAGCCGCCCGAGCGGGAAGGTGAAACGCGTTGA
Upstream 100 bases:
>100_bases CTGAAGGTGGTGGCGCGGCGGGTGGCCCACGAGCACCGTCACGCCGGGTTCCCCGTGAGCCCGTACCTGTACACCTTTGA TGGAGAAAGGATCGTGCGCT
Downstream 100 bases:
>100_bases GCCAGGATGCGATTCATGCCAGGCTGGCCCGGGAACTGGGCCTCACGGTGGGCCAGGTGGAGCGCTGCGTCGCGCTGCTG GACGAGGGCAACACGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSAGKGSEAGFLRQLAEAIRHHGGPAYDAQRARSLAEAVWRDLGHRAPDDFPHLVQEGDLRFVCQWYEQPPIMTVMVWDG EMWRDMERLLLPGEPPEREGETR
Sequences:
>Translated_103_residues MSAGKGSEAGFLRQLAEAIRHHGGPAYDAQRARSLAEAVWRDLGHRAPDDFPHLVQEGDLRFVCQWYEQPPIMTVMVWDG EMWRDMERLLLPGEPPEREGETR >Mature_102_residues SAGKGSEAGFLRQLAEAIRHHGGPAYDAQRARSLAEAVWRDLGHRAPDDFPHLVQEGDLRFVCQWYEQPPIMTVMVWDGE MWRDMERLLLPGEPPEREGETR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11813; Mature: 11682
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGKGSEAGFLRQLAEAIRHHGGPAYDAQRARSLAEAVWRDLGHRAPDDFPHLVQEGDL CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCH RFVCQWYEQPPIMTVMVWDGEMWRDMERLLLPGEPPEREGETR HHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAGKGSEAGFLRQLAEAIRHHGGPAYDAQRARSLAEAVWRDLGHRAPDDFPHLVQEGDL CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCH RFVCQWYEQPPIMTVMVWDGEMWRDMERLLLPGEPPEREGETR HHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA