| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is nudG [C]
Identifier: 51894020
GI number: 51894020
Start: 3108901
End: 3109362
Strand: Reverse
Name: nudG [C]
Synonym: STH2884
Alternate gene names: 51894020
Gene position: 3109362-3108901 (Counterclockwise)
Preceding gene: 51894026
Following gene: 51894019
Centisome position: 87.19
GC content: 68.4
Gene sequence:
>462_bases GTGAGGAAGCGTCAGAAAGCGTACGCCCTCATCGTGGAAAACGGCCGCCTGCTGCTGGTCCGGTATTACTACCCTGAGGA GAACGCCTGGTACTGGAACTTTCCCGGCGGCACGCTGGAGCCGGGTGAGACGCTGGAAGAGGCGCTGAAGCGGGAACTCA TGGAGGAGTGCTCCGTGGAGGTCGAGGTGGGGCCCATGGTCCTGAAGGAGGCTCCTCCCGGCCGGGATTACGTGCGCTAC TTCTTCCGGTGCTGGATTACGAAGGGACGCCCGCAGGTGGGAACCGATCCTGCGACCAACGACTCCATCGGCGCCTTGGA GTGGGTGGACCTGACGGATCCCGGCCGCTGCGGCGGCTGGGGCCGCCGGAACCTGCCCCAGGTGGCCCGTGTGCTTGGGT TCCAGCCGCGCCGCCGGCGCCGGCTCCCGCCGCCCATCCCGCGGCGGGCGGTGCAGCAGTAG
Upstream 100 bases:
>100_bases TTCAGTGTATACTTTCTACCTATAAGCGACCATGGGCGGGAAGGAAGAGATACCCCTTGGCCGAAATAATACAGAATCGG CGAAGCGGGGGGGAGAGAGC
Downstream 100 bases:
>100_bases AGGCGGCACGGGAGGGGTTGCCGATGCAGGTCGTCCGTGCCGGATCATGGCAGAGGTGGACCGTGGCCGGAGCGGCCCTG CTGCTGGTCCTGGTGTACGC
Product: MutT-like protein
Products: CMP; diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRKRQKAYALIVENGRLLLVRYYYPEENAWYWNFPGGTLEPGETLEEALKRELMEECSVEVEVGPMVLKEAPPGRDYVRY FFRCWITKGRPQVGTDPATNDSIGALEWVDLTDPGRCGGWGRRNLPQVARVLGFQPRRRRRLPPPIPRRAVQQ
Sequences:
>Translated_153_residues MRKRQKAYALIVENGRLLLVRYYYPEENAWYWNFPGGTLEPGETLEEALKRELMEECSVEVEVGPMVLKEAPPGRDYVRY FFRCWITKGRPQVGTDPATNDSIGALEWVDLTDPGRCGGWGRRNLPQVARVLGFQPRRRRRLPPPIPRRAVQQ >Mature_153_residues MRKRQKAYALIVENGRLLLVRYYYPEENAWYWNFPGGTLEPGETLEEALKRELMEECSVEVEVGPMVLKEAPPGRDYVRY FFRCWITKGRPQVGTDPATNDSIGALEWVDLTDPGRCGGWGRRNLPQVARVLGFQPRRRRRLPPPIPRRAVQQ
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 17773; Mature: 17773
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKRQKAYALIVENGRLLLVRYYYPEENAWYWNFPGGTLEPGETLEEALKRELMEECSVE CCCCCCEEEEEEECCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCE VEVGPMVLKEAPPGRDYVRYFFRCWITKGRPQVGTDPATNDSIGALEWVDLTDPGRCGGW EEECCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC GRRNLPQVARVLGFQPRRRRRLPPPIPRRAVQQ CCCCHHHHHHHHCCCCHHHCCCCCCCCHHHCCC >Mature Secondary Structure MRKRQKAYALIVENGRLLLVRYYYPEENAWYWNFPGGTLEPGETLEEALKRELMEECSVE CCCCCCEEEEEEECCCEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCE VEVGPMVLKEAPPGRDYVRYFFRCWITKGRPQVGTDPATNDSIGALEWVDLTDPGRCGGW EEECCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC GRRNLPQVARVLGFQPRRRRRLPPPIPRRAVQQ CCCCHHHHHHHHCCCCHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CTP; H2O [C]
Specific reaction: CTP + H2O = CMP + diphosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA