Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is bp26 [H]

Identifier: 51893984

GI number: 51893984

Start: 3066212

End: 3066949

Strand: Reverse

Name: bp26 [H]

Synonym: STH2846

Alternate gene names: 51893984

Gene position: 3066949-3066212 (Counterclockwise)

Preceding gene: 51893986

Following gene: 51893983

Centisome position: 86.0

GC content: 67.21

Gene sequence:

>738_bases
TTGCGGAACGGTCTTCTCACGGTTATCCTCGCCGGCCTCCTGATTCTCGGCATCGCAGCCTTCCTGCCGCAGGCCGCGCC
GGTCCACGCGGCTGAGGACGATACCCCCGTGCGGACCCTGTCGGTAGTGGGACGGGGTGAGCTCGAGGTAAAGCCAGACA
CCGCGGTCATCACAGTGGGCGTCAGCGAGGTCAAGCCGACGCCGATCGAGGCGTACAACGCCCTGAGCGACAGCATCAAC
AAGGTGGCCGAAGCCCTGAAGGCCAAGGGCGTGAAGGAGGAGGAGCTCCAGACCAGCATGTTCCAGCTCGCCGCCGAGTA
CAACTGGACGCAGGAGCGGGGCCAGGAGCTGGTCGGCTACCGGGCGACCAACACCCTGTCCATCACCACGCAGGACCTGG
ACAAGGTCGCCGAGCTGATCCAGGCGGCGGTTCAGGCCGGGGCCAACGATCTCCGGGGCGTCACCTTCCAGGTGAAGAAC
GCCGACAAGCTGCTGGATGACGCGCTGAAGCTGGCGGTAGCCGATGCCAAGGCCAAGGCGGAGCTGGTCGCCGGCGAGCT
CGGCGCCAAGGTGGTCCGGGTCCACTCGGTCAGCGTCCAGGACCAGGGCGCGTCGCTGGTCAAGGCCCGGGCCGGGTTCA
ACATGGACGGGGTGGCCGCGGAAATCGCGCCGGTGCCCGTGTACGCCGGCACATCCACGTTCTCGGCGACGGTTTCGGTG
ACGTTCGAGCTGCAGTAG

Upstream 100 bases:

>100_bases
ACCCGGGATTCCTTTTACCGGTGGCAAGAAGATGAACCCGGCGTACCGACTCCTCCCGTCTAACGGGAGGACACCACGCA
GAGGAGGGATCCGAATGAGG

Downstream 100 bases:

>100_bases
CGCGGCCCCGTACACAGCGGCTCCACCGCAGCGGGCGCGCGGAGCGGGGTCCCCTCCTCGTGGGAGGAGGGGACCCCTTG
TTCTGTCCGGCCGGCGCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRNGLLTVILAGLLILGIAAFLPQAAPVHAAEDDTPVRTLSVVGRGELEVKPDTAVITVGVSEVKPTPIEAYNALSDSIN
KVAEALKAKGVKEEELQTSMFQLAAEYNWTQERGQELVGYRATNTLSITTQDLDKVAELIQAAVQAGANDLRGVTFQVKN
ADKLLDDALKLAVADAKAKAELVAGELGAKVVRVHSVSVQDQGASLVKARAGFNMDGVAAEIAPVPVYAGTSTFSATVSV
TFELQ

Sequences:

>Translated_245_residues
MRNGLLTVILAGLLILGIAAFLPQAAPVHAAEDDTPVRTLSVVGRGELEVKPDTAVITVGVSEVKPTPIEAYNALSDSIN
KVAEALKAKGVKEEELQTSMFQLAAEYNWTQERGQELVGYRATNTLSITTQDLDKVAELIQAAVQAGANDLRGVTFQVKN
ADKLLDDALKLAVADAKAKAELVAGELGAKVVRVHSVSVQDQGASLVKARAGFNMDGVAAEIAPVPVYAGTSTFSATVSV
TFELQ
>Mature_245_residues
MRNGLLTVILAGLLILGIAAFLPQAAPVHAAEDDTPVRTLSVVGRGELEVKPDTAVITVGVSEVKPTPIEAYNALSDSIN
KVAEALKAKGVKEEELQTSMFQLAAEYNWTQERGQELVGYRATNTLSITTQDLDKVAELIQAAVQAGANDLRGVTFQVKN
ADKLLDDALKLAVADAKAKAELVAGELGAKVVRVHSVSVQDQGASLVKARAGFNMDGVAAEIAPVPVYAGTSTFSATVSV
TFELQ

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 25740; Mature: 25740

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNGLLTVILAGLLILGIAAFLPQAAPVHAAEDDTPVRTLSVVGRGELEVKPDTAVITVG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEEE
VSEVKPTPIEAYNALSDSINKVAEALKAKGVKEEELQTSMFQLAAEYNWTQERGQELVGY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCHHHHCE
RATNTLSITTQDLDKVAELIQAAVQAGANDLRGVTFQVKNADKLLDDALKLAVADAKAKA
ECCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
ELVAGELGAKVVRVHSVSVQDQGASLVKARAGFNMDGVAAEIAPVPVYAGTSTFSATVSV
HHHHHHHCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCCHHCCCCEEEECCCCEEEEEEE
TFELQ
EEEEC
>Mature Secondary Structure
MRNGLLTVILAGLLILGIAAFLPQAAPVHAAEDDTPVRTLSVVGRGELEVKPDTAVITVG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCEEEEEE
VSEVKPTPIEAYNALSDSINKVAEALKAKGVKEEELQTSMFQLAAEYNWTQERGQELVGY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCHHHHCE
RATNTLSITTQDLDKVAELIQAAVQAGANDLRGVTFQVKNADKLLDDALKLAVADAKAKA
ECCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
ELVAGELGAKVVRVHSVSVQDQGASLVKARAGFNMDGVAAEIAPVPVYAGTSTFSATVSV
HHHHHHHCCEEEEEEEEEECCCCHHHHHHHCCCCCCCCCHHCCCCEEEECCCCEEEEEEE
TFELQ
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748294 [H]