Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51893983

Identifier: 51893983

GI number: 51893983

Start: 3065827

End: 3065961

Strand: Reverse

Name: 51893983

Synonym: STH2845

Alternate gene names: NA

Gene position: 3065961-3065827 (Counterclockwise)

Preceding gene: 51893984

Following gene: 51893982

Centisome position: 85.97

GC content: 69.63

Gene sequence:

>135_bases
GTGATGGCGCCGCTTTCGGTGGTGCTGCGCCGCAACCGGTACCTGTCCGAGGCGTTCCTGCTCGCGTTCGGGGTCTGCGC
AGCGATCGGCATGGCCCTCATCTTCGTGGCCGGGCTGCTCGCCCTGGGGACCTGA

Upstream 100 bases:

>100_bases
ATAAATAACAAACGAGATCGAAAAGTCGGATAAATGGGGGCGGTGGAGGATGGGCTCCGTTCTGGGACTGGGCGTGATCG
ACCTGGCGCTGGGCATCCTG

Downstream 100 bases:

>100_bases
GCCGCGCGGGCCGCAGGGGTTCACCGCGACAGCCCACCGCCGGGGAAAAGGGGTTTTCGCCTGCGAAAGCGAATACGTCA
TGGCAGATGCGCTGTGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MMAPLSVVLRRNRYLSEAFLLAFGVCAAIGMALIFVAGLLALGT

Sequences:

>Translated_44_residues
MMAPLSVVLRRNRYLSEAFLLAFGVCAAIGMALIFVAGLLALGT
>Mature_44_residues
MMAPLSVVLRRNRYLSEAFLLAFGVCAAIGMALIFVAGLLALGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4642; Mature: 4642

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAPLSVVLRRNRYLSEAFLLAFGVCAAIGMALIFVAGLLALGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMAPLSVVLRRNRYLSEAFLLAFGVCAAIGMALIFVAGLLALGT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA