Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893732

Identifier: 51893732

GI number: 51893732

Start: 2783822

End: 2784154

Strand: Reverse

Name: 51893732

Synonym: STH2594

Alternate gene names: NA

Gene position: 2784154-2783822 (Counterclockwise)

Preceding gene: 51893733

Following gene: 51893731

Centisome position: 78.07

GC content: 66.67

Gene sequence:

>333_bases
ATGCCAGGAGGGCGGAAGAGGATGACCGTGTACCACAAGCTGGTCCGGGACCGGATCCCGGAAATCATCGAGGCGTCCGG
CCGAAGGTGCGTGGTCCGCGTGCTCGACGACCAGGCCTACCTCGACAGCCTGCACCGGAAGCTGGAGGAGGAGCTGCAGG
AGTACCTGACCAGCCGCAGCCTGGAGGAGCTGGCGGACCTGCTGGAGGTCGCGTACGCGATCGCCGAGTTCAGGGGCGTT
CGCCCGGAGCAGCTGGAACAGGTGCGCCGGGAAAAACGCGAAGCCCGCAGCGGCTTTAGGCGGCGGCTCTTTCTGCTCCA
GGTGTCGGACTGA

Upstream 100 bases:

>100_bases
TGCAGGGTTGGCCCTGCAGCGCTTTTGCTTTCGGCGCGGAGAAGCTTCCGTTTCACCCAACGCACCCCGTGTACCGGAAG
GCATCCGACCACGGCGATCC

Downstream 100 bases:

>100_bases
CCCGTCACGCCTCCATGTCACACCGTCCTCCTAGTTTACATATTGTGTCCTGACCCGGACGGCGCTGAGAGGAGGCGACG
CCAGGTGATCCCCATCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRSLEELADLLEVAYAIAEFRGV
RPEQLEQVRREKREARSGFRRRLFLLQVSD

Sequences:

>Translated_110_residues
MPGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRSLEELADLLEVAYAIAEFRGV
RPEQLEQVRREKREARSGFRRRLFLLQVSD
>Mature_109_residues
PGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRSLEELADLLEVAYAIAEFRGVR
PEQLEQVRREKREARSGFRRRLFLLQVSD

Specific function: Unknown

COG id: COG4997

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13056; Mature: 12925

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LEELADLLEVAYAIAEFRGVRPEQLEQVRREKREARSGFRRRLFLLQVSD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure 
PGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRS
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LEELADLLEVAYAIAEFRGVRPEQLEQVRREKREARSGFRRRLFLLQVSD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA