| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893732
Identifier: 51893732
GI number: 51893732
Start: 2783822
End: 2784154
Strand: Reverse
Name: 51893732
Synonym: STH2594
Alternate gene names: NA
Gene position: 2784154-2783822 (Counterclockwise)
Preceding gene: 51893733
Following gene: 51893731
Centisome position: 78.07
GC content: 66.67
Gene sequence:
>333_bases ATGCCAGGAGGGCGGAAGAGGATGACCGTGTACCACAAGCTGGTCCGGGACCGGATCCCGGAAATCATCGAGGCGTCCGG CCGAAGGTGCGTGGTCCGCGTGCTCGACGACCAGGCCTACCTCGACAGCCTGCACCGGAAGCTGGAGGAGGAGCTGCAGG AGTACCTGACCAGCCGCAGCCTGGAGGAGCTGGCGGACCTGCTGGAGGTCGCGTACGCGATCGCCGAGTTCAGGGGCGTT CGCCCGGAGCAGCTGGAACAGGTGCGCCGGGAAAAACGCGAAGCCCGCAGCGGCTTTAGGCGGCGGCTCTTTCTGCTCCA GGTGTCGGACTGA
Upstream 100 bases:
>100_bases TGCAGGGTTGGCCCTGCAGCGCTTTTGCTTTCGGCGCGGAGAAGCTTCCGTTTCACCCAACGCACCCCGTGTACCGGAAG GCATCCGACCACGGCGATCC
Downstream 100 bases:
>100_bases CCCGTCACGCCTCCATGTCACACCGTCCTCCTAGTTTACATATTGTGTCCTGACCCGGACGGCGCTGAGAGGAGGCGACG CCAGGTGATCCCCATCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRSLEELADLLEVAYAIAEFRGV RPEQLEQVRREKREARSGFRRRLFLLQVSD
Sequences:
>Translated_110_residues MPGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRSLEELADLLEVAYAIAEFRGV RPEQLEQVRREKREARSGFRRRLFLLQVSD >Mature_109_residues PGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRSLEELADLLEVAYAIAEFRGVR PEQLEQVRREKREARSGFRRRLFLLQVSD
Specific function: Unknown
COG id: COG4997
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13056; Mature: 12925
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRS CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEELADLLEVAYAIAEFRGVRPEQLEQVRREKREARSGFRRRLFLLQVSD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure PGGRKRMTVYHKLVRDRIPEIIEASGRRCVVRVLDDQAYLDSLHRKLEEELQEYLTSRS CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEELADLLEVAYAIAEFRGVRPEQLEQVRREKREARSGFRRRLFLLQVSD HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA