| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893719
Identifier: 51893719
GI number: 51893719
Start: 2764833
End: 2766446
Strand: Reverse
Name: 51893719
Synonym: STH2581
Alternate gene names: NA
Gene position: 2766446-2764833 (Counterclockwise)
Preceding gene: 51893721
Following gene: 51893718
Centisome position: 77.58
GC content: 77.2
Gene sequence:
>1614_bases GTGGGACAGGTGCTCTTCTACCGCGCACCCCTGGACAGGCCCGCAGCGGCGCTGCACGTGACGGTGAGCCCGGTGCGCAC CGCCGTCCTGCCCTCGCTCACGGAAGCCCCCGTCCTTCCCGGTCGGGTGCGGGTGGTGGTGCGGTACGGCCCCCGCACCG GCCCCGTCGGGGTCCACCGGGGCTGGCTCCACACGGACCTGCCGCCGGCGCGGCGGCTGCGGCTGGCGGGCTGTCAGCAG GACGACGGCGGGCTCCTGCTGTCGCTGGCCACCGTCCCGACCCGGGCGGGGCGGGAGAGCCTGACGGACCGGTTTCGCCT GCCTCTCCATATGACGACATGGGGTATCGAAGCGATCTCGGGTGTGCGGGTCGAACTGTTCTGCATTCCGTCCGTCCTGC CGGGGCGGCTGGTCCTGCGGGGGCGCGCCGCGGTGGCGGTCGAGACGCCCGCGGAGCGACTGGTCCGCGCCGTCCCCTTC TGCCGGGGGCGCGCTGTGGCGCTGAACCCGCACCTGAGCTGGCGCGCCCGGGCCGCGGTGGAGGGACTGGACCTCCGGGT GGCGCCGGGCGGCTTGGTGGAAGGCTGGCTCCACGTGGCGGTGGCCTGCTGGGGCGAACCCGAGGAGGCGATGGGGGGGG CCGCGGCGGCCCCGGCGGATCCCGTGGCGGTGCGCCGGGTGGACGCGGCGATCGCCCGGGTGGAGGCGGAGGCGGTACGG GACGGGCTGGCGCTGGTGTCCGGCGCCGTGGAGCTGGACGTCGCCTGGGCGGATCGCTCCGGCCGGGGCCGGTGGACCTG CCGGGCGGTTCCCTTCAGCGCGCTGGTCCCCCTCGCGGGGCTGTGCGAGGGGGACCAGCTGGAGCCGGTGGCCCAGGTGG AGCAGCTGTCCCGGGTGGGGGCGGGGGCTTCGGCGCGGGCGACGCTGCTTCTGGGGATCGGGCTGACCGCCCTCAGGCCG GTGCACCGGGAGATCGGCGGTGCGTGGTACCGGATGGCGCAGGTGGTGGGCCAGGCGGTGGCGACGGTGCAGCTGGACGA GCCGCTCTTTCCCCGGGAGGAGCGATCGGCGCCCACGGAACCGTGGCGGCGGGTACGGCTGGACCTGGGTCAGCACGGGC CCTGGAAGGCGCTGCGCGCCCGGATCCGGCGCACCTGCGGACGGTCGTCCCTGGAGGTGCAGGGCGAGCCGTTCGGGGCC GAGTCCGGCGCTGCCACCGGGGTCCGGCTGGAGCTGCCCGGCGGAGCGGATGCCCAGGTGAGCCTGGCAGCGGTCGGCCC GCAGGCGGAACTGCGGGTTCGTCGGCCGGCACGGGGCGGCGTGGAAGTGCCCCTGCCGCGGGGGACGGGCCGCGGGGGAT GGCACCTGCTGGCCGGGCCGGCCCGGTGGGTGGTGGACGCATCTCCCTGCGCCGACGGGCTGCGCTGCCTGGTGCGGGAC GCCGGCGGGCTGCGGCACGTGGTGCTGGTTGCGGAGCGGGAGGCCGGCGGGGAGGCGGCGGAGGACGGGCACGGCCAGGG GGCTGGCGGGAACCTGCCGGCGGCCTGGACGGTGGCGGGGACGGCGGTGAGGGGGCTGGGCATGGACCGGGTATGGGCGG AGGTCGAGGGGTGA
Upstream 100 bases:
>100_bases GTGTGGAGACTACTTCTACGATTTCCTTCTTTTTCCTCTCCAGGAGGAATGATGAAACCGGGTTCTGGCGGATGCCGAAG GGGCGTATAGGTGCCCTGAG
Downstream 100 bases:
>100_bases GGGGGTGCAGCGGCAGATGCACCGGCGTTTGGGTGCAAGAGTCGGTACGAAAGTACCATTTCTATCTATAGTAGTTATTG ATATAATGACTGTCGTAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MGQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHRGWLHTDLPPARRLRLAGCQQ DDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAISGVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPF CRGRAVALNPHLSWRARAAVEGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVGAGASARATLLLGIGLTALRP VHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTEPWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGA ESGAATGVRLELPGGADAQVSLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG
Sequences:
>Translated_537_residues MGQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHRGWLHTDLPPARRLRLAGCQQ DDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAISGVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPF CRGRAVALNPHLSWRARAAVEGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVGAGASARATLLLGIGLTALRP VHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTEPWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGA ESGAATGVRLELPGGADAQVSLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG >Mature_536_residues GQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHRGWLHTDLPPARRLRLAGCQQD DGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAISGVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPFC RGRAVALNPHLSWRARAAVEGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVRD GLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVGAGASARATLLLGIGLTALRPV HREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTEPWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGAE SGAATGVRLELPGGADAQVSLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRDA GGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56677; Mature: 56546
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHR CCCEEEEECCCCCCCEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC GWLHTDLPPARRLRLAGCQQDDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAIS CCCCCCCCHHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCHHHHC GVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPFCRGRAVALNPHLSWRARAAV CCEEEEEEECCCCCCEEEEECCEEEEEECCHHHHHHHCCCCCCCEEEECCCCCCHHHHHC EGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR CCCEEEECCCHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVG CCHHHHCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHC AGASARATLLLGIGLTALRPVHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTE CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCC PWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGAESGAATGVRLELPGGADAQV HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEE SLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD EEEEECCCCEEEEECCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHC AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHEEECCC >Mature Secondary Structure GQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHR CCEEEEECCCCCCCEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC GWLHTDLPPARRLRLAGCQQDDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAIS CCCCCCCCHHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCHHHHC GVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPFCRGRAVALNPHLSWRARAAV CCEEEEEEECCCCCCEEEEECCEEEEEECCHHHHHHHCCCCCCCEEEECCCCCCHHHHHC EGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR CCCEEEECCCHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVG CCHHHHCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHC AGASARATLLLGIGLTALRPVHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTE CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCC PWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGAESGAATGVRLELPGGADAQV HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEE SLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD EEEEECCCCEEEEECCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHC AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA