| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893709
Identifier: 51893709
GI number: 51893709
Start: 2756367
End: 2757329
Strand: Reverse
Name: 51893709
Synonym: STH2571
Alternate gene names: NA
Gene position: 2757329-2756367 (Counterclockwise)
Preceding gene: 51893712
Following gene: 51893704
Centisome position: 77.32
GC content: 71.55
Gene sequence:
>963_bases ATGCTGTGTACCCGTCTGTGCGAGTTGCTTTCCATCGAGTACCCCATCATCCAGGGGGGGCTGGCGTATCTCGCCCGGGC CGAGCTCTGCGCGGCGGTGTCCGAGGCCGGCGGCCTGGGGCAGATTACCGCCGCGACGCTGGGCAGCCCCGAGGAGCTCC GGGAGGAGATCCGCAAGGTGCGGGCCCTTACCCGCAAGCCCTTCGGCGTCAACTTCGCGATGGGCTACCGCTCCCTGGAG CCATACATCGACGCGGCGCTGGAGGAAGGGGTGCGCATCGTCACCATCACCGGCGGGAACCCCGAGCCGTACATGAAGTA CATCGACGCTCGGGTGCCGGGCGTGATGAAGATCATCCTGGTGGCCGGCGTGCGGGCCGCGCAGAAGGCGGAGGCGCTGG GGGCCGACGCGGTCATCGCCGTCGGCTACGACGGCGGCGGCCACCTGGGGCGGGACGACGTGGGCACCATGGCCCTGATC CCCCGCATCGTCGACTCGGTGAAGATCCCTGTGGCGGCCAGCGGCGGCATCGTCGACGGCCGCGGGCTCATGGCCGCCCT GGCCCTGGGCGCGGACGGCATCGAGATGGGCACCCGCTTCGTCGCGGTGCAGGAGTGCCCCGCCCACGAGGCGTACAAGC AGTTGCTCCTGGAGACTCGGGAGAACGAGACGGTCATCATGGAGCGCTCCATCGGCCGCCCGGCCCGGGTGCTGAGGACC GGCGGGGCCCTGCGGGTGCTGGAGGCGGAGGCCCGGGGCGCCACCCTGGAGGAGCTCCTGCCGCTGATCTCCGGCAAGGT CAACGCCAGGGCGGCCCTGGAGGGGGACATGGAGGAGGGCTTCGTCTACGCCGGCCAGGGCGTCGGCCTCATCCACGACA TCCCCACCGTGGCCGAGCTCTTCGCCCGCATCCTGGCCGAGGCCCGCGCCATCGGCGAGCGGCTCCGGGGTCTCGGGGTA TGA
Upstream 100 bases:
>100_bases GAAGGCGGACCCGCACGTCTGTTTGCTGAAGATTGTTGATCTTGTGAGGAGGATTCCCTTCCGCCCCGGGTTAATACTTG GGAGAGGAGGTGGGGCGGGC
Downstream 100 bases:
>100_bases AACGGGCTGTCCCCGCGCCACCGTGAAGGACGCGGGGACAGCCCATGCTTCGCCTCAGTGTACCTTTCCGTCCGACACCA TCTTGGTGACCATGCTCGCC
Product: putative enoyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKVRALTRKPFGVNFAMGYRSLE PYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIILVAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALI PRIVDSVKIPVAASGGIVDGRGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAELFARILAEARAIGERLRGLGV
Sequences:
>Translated_320_residues MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKVRALTRKPFGVNFAMGYRSLE PYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIILVAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALI PRIVDSVKIPVAASGGIVDGRGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAELFARILAEARAIGERLRGLGV >Mature_320_residues MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKVRALTRKPFGVNFAMGYRSLE PYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIILVAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALI PRIVDSVKIPVAASGGIVDGRGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAELFARILAEARAIGERLRGLGV
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33800; Mature: 33800
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKV CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHH RALTRKPFGVNFAMGYRSLEPYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIIL HHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHH VAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALIPRIVDSVKIPVAASGGIVDG HHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEECC RGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT HHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHC GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAEL CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHH FARILAEARAIGERLRGLGV HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKV CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHH RALTRKPFGVNFAMGYRSLEPYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIIL HHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHH VAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALIPRIVDSVKIPVAASGGIVDG HHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEECC RGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT HHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHC GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAEL CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHH FARILAEARAIGERLRGLGV HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]