Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893709

Identifier: 51893709

GI number: 51893709

Start: 2756367

End: 2757329

Strand: Reverse

Name: 51893709

Synonym: STH2571

Alternate gene names: NA

Gene position: 2757329-2756367 (Counterclockwise)

Preceding gene: 51893712

Following gene: 51893704

Centisome position: 77.32

GC content: 71.55

Gene sequence:

>963_bases
ATGCTGTGTACCCGTCTGTGCGAGTTGCTTTCCATCGAGTACCCCATCATCCAGGGGGGGCTGGCGTATCTCGCCCGGGC
CGAGCTCTGCGCGGCGGTGTCCGAGGCCGGCGGCCTGGGGCAGATTACCGCCGCGACGCTGGGCAGCCCCGAGGAGCTCC
GGGAGGAGATCCGCAAGGTGCGGGCCCTTACCCGCAAGCCCTTCGGCGTCAACTTCGCGATGGGCTACCGCTCCCTGGAG
CCATACATCGACGCGGCGCTGGAGGAAGGGGTGCGCATCGTCACCATCACCGGCGGGAACCCCGAGCCGTACATGAAGTA
CATCGACGCTCGGGTGCCGGGCGTGATGAAGATCATCCTGGTGGCCGGCGTGCGGGCCGCGCAGAAGGCGGAGGCGCTGG
GGGCCGACGCGGTCATCGCCGTCGGCTACGACGGCGGCGGCCACCTGGGGCGGGACGACGTGGGCACCATGGCCCTGATC
CCCCGCATCGTCGACTCGGTGAAGATCCCTGTGGCGGCCAGCGGCGGCATCGTCGACGGCCGCGGGCTCATGGCCGCCCT
GGCCCTGGGCGCGGACGGCATCGAGATGGGCACCCGCTTCGTCGCGGTGCAGGAGTGCCCCGCCCACGAGGCGTACAAGC
AGTTGCTCCTGGAGACTCGGGAGAACGAGACGGTCATCATGGAGCGCTCCATCGGCCGCCCGGCCCGGGTGCTGAGGACC
GGCGGGGCCCTGCGGGTGCTGGAGGCGGAGGCCCGGGGCGCCACCCTGGAGGAGCTCCTGCCGCTGATCTCCGGCAAGGT
CAACGCCAGGGCGGCCCTGGAGGGGGACATGGAGGAGGGCTTCGTCTACGCCGGCCAGGGCGTCGGCCTCATCCACGACA
TCCCCACCGTGGCCGAGCTCTTCGCCCGCATCCTGGCCGAGGCCCGCGCCATCGGCGAGCGGCTCCGGGGTCTCGGGGTA
TGA

Upstream 100 bases:

>100_bases
GAAGGCGGACCCGCACGTCTGTTTGCTGAAGATTGTTGATCTTGTGAGGAGGATTCCCTTCCGCCCCGGGTTAATACTTG
GGAGAGGAGGTGGGGCGGGC

Downstream 100 bases:

>100_bases
AACGGGCTGTCCCCGCGCCACCGTGAAGGACGCGGGGACAGCCCATGCTTCGCCTCAGTGTACCTTTCCGTCCGACACCA
TCTTGGTGACCATGCTCGCC

Product: putative enoyl-(acyl-carrier-protein) reductase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKVRALTRKPFGVNFAMGYRSLE
PYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIILVAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALI
PRIVDSVKIPVAASGGIVDGRGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT
GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAELFARILAEARAIGERLRGLGV

Sequences:

>Translated_320_residues
MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKVRALTRKPFGVNFAMGYRSLE
PYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIILVAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALI
PRIVDSVKIPVAASGGIVDGRGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT
GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAELFARILAEARAIGERLRGLGV
>Mature_320_residues
MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKVRALTRKPFGVNFAMGYRSLE
PYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIILVAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALI
PRIVDSVKIPVAASGGIVDGRGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT
GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAELFARILAEARAIGERLRGLGV

Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 33800; Mature: 33800

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKV
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHH
RALTRKPFGVNFAMGYRSLEPYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIIL
HHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHH
VAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALIPRIVDSVKIPVAASGGIVDG
HHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEECC
RGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT
HHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHC
GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAEL
CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHH
FARILAEARAIGERLRGLGV
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLCTRLCELLSIEYPIIQGGLAYLARAELCAAVSEAGGLGQITAATLGSPEELREEIRKV
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHH
RALTRKPFGVNFAMGYRSLEPYIDAALEEGVRIVTITGGNPEPYMKYIDARVPGVMKIIL
HHHHCCCCCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCHHHHHHH
VAGVRAAQKAEALGADAVIAVGYDGGGHLGRDDVGTMALIPRIVDSVKIPVAASGGIVDG
HHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCEECC
RGLMAALALGADGIEMGTRFVAVQECPAHEAYKQLLLETRENETVIMERSIGRPARVLRT
HHHHHHHHHCCCCHHHCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHC
GGALRVLEAEARGATLEELLPLISGKVNARAALEGDMEEGFVYAGQGVGLIHDIPTVAEL
CCCEEEEECCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCHHHHHHHHHHH
FARILAEARAIGERLRGLGV
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]