Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893657

Identifier: 51893657

GI number: 51893657

Start: 2703625

End: 2704656

Strand: Reverse

Name: 51893657

Synonym: STH2519

Alternate gene names: NA

Gene position: 2704656-2703625 (Counterclockwise)

Preceding gene: 51893658

Following gene: 51893656

Centisome position: 75.84

GC content: 63.66

Gene sequence:

>1032_bases
ATGCTCACGGAGGTCGCCGTCCCGCACCAACTCCTGGATGACGGGGAGCTGACGGACAGTGCCCGGGTGCTCTGGTGCTA
CCTGCGGGCGATCCGAAAGCAGAAGACGCGCCTGACATGGGCCGAACTGCGGCGCGTTACGGGGCTGTCGCAGTACCGTC
TGAAGCAGCACATGCGCGCGCTGGATGCCCTTCGGTGGATTCAGCTGGACTCCTTGGGCACGCGCGAGTTCGAGTGCTGC
GCCCTGTGGCGCGGCACGCGCGCGTTTACCATCCCCGTGGACCTCGTGCTGGACCGGCGCATCCCCCACGGGGCAAAGTG
GCTGTGGGCGCACATCCGGGGGGTGGGTGAGTTCGATTACGCCCAACTCCAGCACGTGATGCGGTGCTCCCGGATCAGCC
TGAGGAAGTACGTGCGGATCCTCAGCCATTACGGCTGGCTTGTTGGTGAGGTGGTCCGCGCAGGGCGGTGCAAGGTCTAC
CGCTTCGAGACGGTGAACATCATCGACGAAAACCGGCATGCGGACGTGCAGGATTTCTACGAAGGGCTGCGCCTCGCCAG
GTTGAAGGAGCGGTACTCCGTAGGCCAATACTTGCTGAAGTGCATCGTCGCGGTGTTGGTCGTCGACCAGCTCCTCATTG
AGAACGGCGAGGTGTTGCGGCTGGTCAACCCGTTCACCGGAGGGCAGCTGCACTACGACCTGCTCCTCCCTGTGTCCCGG
GTTGCCCTGGAGTTTCAGGGGCCCCAGCATTACCGAACCACGCAGCGTTATCCTTCAGACACGCAACTGCAGGAGCAGAG
GATGCGCGATGACATCAAACGCAGGTTCAGCGAGACCCACGGGATCACCCTCATCGAAGTCAGAGCGGATGACCTGAGCT
TCGGGACCATCAGCAGCCTGCTGCGGCGGCACAACGTTCCGATCAGACACAGCCTGGATGACCAGCGGCATCTGTGCGAT
GCGATCGAGGCAGAGGCGGCGAACTACCGTCGGTGGGCGCAGCGGCTCGAACGGCGGCTCTCCAGTGGATAG

Upstream 100 bases:

>100_bases
ACATTCGTGGTCCTGGCCGGCTTCGGGGAGAAGGAAATTATTGGAAGTTGCAAGAATCTGATCATAGAGTGAACCGCGCT
TTCCCGAGGTGATGCCTGCC

Downstream 100 bases:

>100_bases
GGACAGTCCTGGCCTGCTATCCGCAGTGGCAGGGACCGGCCCGGACGTCGTCCCGGAAAAGGGCTGTCCGGAATTGGACA
GCCTCATGACCCTTTGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRALDALRWIQLDSLGTREFECC
ALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDYAQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVY
RFETVNIIDENRHADVQDFYEGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR
VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSLLRRHNVPIRHSLDDQRHLCD
AIEAEAANYRRWAQRLERRLSSG

Sequences:

>Translated_343_residues
MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRALDALRWIQLDSLGTREFECC
ALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDYAQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVY
RFETVNIIDENRHADVQDFYEGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR
VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSLLRRHNVPIRHSLDDQRHLCD
AIEAEAANYRRWAQRLERRLSSG
>Mature_343_residues
MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRALDALRWIQLDSLGTREFECC
ALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDYAQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVY
RFETVNIIDENRHADVQDFYEGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR
VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSLLRRHNVPIRHSLDDQRHLCD
AIEAEAANYRRWAQRLERRLSSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40270; Mature: 40270

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRA
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHH
LDALRWIQLDSLGTREFECCALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDY
HHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCH
AQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVYRFETVNIIDENRHADVQDFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHH
EGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHH
VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSL
HHEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
LRRHNVPIRHSLDDQRHLCDAIEAEAANYRRWAQRLERRLSSG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRA
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHH
LDALRWIQLDSLGTREFECCALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDY
HHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCH
AQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVYRFETVNIIDENRHADVQDFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHH
EGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHH
VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSL
HHEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
LRRHNVPIRHSLDDQRHLCDAIEAEAANYRRWAQRLERRLSSG
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA