Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893645

Identifier: 51893645

GI number: 51893645

Start: 2692170

End: 2693387

Strand: Reverse

Name: 51893645

Synonym: STH2507

Alternate gene names: NA

Gene position: 2693387-2692170 (Counterclockwise)

Preceding gene: 51893646

Following gene: 51893644

Centisome position: 75.53

GC content: 72.09

Gene sequence:

>1218_bases
ATGGACCAGATCGACCGCGAACGACTGAAAGAGGTGCTGGAGTTCATCCGTAGCCACGCGCCGCGCCCGGTGCTGAGCAG
CCTGGAGGCGGAGCTGGCGGTCATCGAGCAGTACATCGTCAACGCCAGGGCCCCCCGGATCGCCCTGGTGGGCAGGCGGG
GGTCGGGCAAGTCCAGCCTGGTCAACGCCATCTTCGGCGCGCCCCTGGCCGAGACCGGTGCGGTGCTCTCCACCACGGCC
GCGGGCACCTGGTACCAGTACGAGGGGCCCAACGGGTCGCTGGAGGTGCTGGACACCCGCGGCCTGGGCGAGGGGGAGCG
GCCTGCGGGGGCGACGGAGGAGGACGCGGTGGCCGAGAACCTGAAGGCGGTGCGGGACCGCTGCCCCGATGCGATCCTCT
TCCTGGTCAAGGCCGTCGACGTGGACGCGTGGATCCAGAACGACTTGGAGCAGGTCGCGGCGCTGCGCGGGGCCATCTCC
CGGCGGCACGGGTTTGAGCCGCCGGTGATCGGCGTGCTCACCCAGGTGGACCAGCTTGCCCCGGCCGACGTGGCCGAGCC
GCCCTACGACGACCCGGAGAAGCGGGCCAACATCCGGCTGGCCCTGGAGAAGCTGGCGGAGCGGATGGAGCGGCTGCTGG
ACCGGCCGGTCCGGGTCTTCGCCACCTCCGCCTACATGCGCTACCGGGACGGCGTGCGGGTGGTGGACCGCCGGTGGGGG
ATCGATGAGCTGGTCTCCTACCTGGTGGAGACGCTGCCCGGCGAGGCGCAGCTCACCATGGGCCGGGTGGCCGGCGTCAA
GGCGGCCCAGACCAAGATCGCCGGCGCCCTCATCCAGTCCACCGCCTCCGCGGCCGCGGCGGTGGCCGCGACGCCGATCC
CGCTCGCGGACATGCCGATCCTCACCGGCATGCAGGTGCTCATGGTCACCGGCATCGCCTACCTGGCGGGCCGGCGGCTG
TCCCGGGAGGCGGCCCTGGAGTTCATCGGCGCCCTGGGGGTGAACGTGGGCGCGGGCTTCGCCCTGCGGGAGCTGGCCCG
GGGGCTCTCCAAGTGGTTGCTGCCCGGCGGCGGGTCGCTGGTCTCGGCCGGCGTCGCGTACTGGGGCACCTACGGCCTCG
GCCAGGCCGCGGTGGCGTACTACATCGAGAACCAGCCCATCGAGGCGGCCCGGAAGCTGCTGGAGCAGAGCCGGGACAGA
ATCGTAAAGAAGCCGTAA

Upstream 100 bases:

>100_bases
CACCGCCGCGGGCCGGGCGTTCCGTCTCCGGGCAGGGATCATCGGTTCTCACCAAGAAATTTCGGGGACGACACAGATCC
TGACGCGGAGGAGGCCCCCG

Downstream 100 bases:

>100_bases
GGTTTGCGTTCCGCCTGCCGTAAGAACCGCGCGGTAGGCTGGCGTACAGGACGAGGTGACGGTGGATGGCGGAGCCGCTG
ATCCTGGTCGTGGACGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSLVNAIFGAPLAETGAVLSTTA
AGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAENLKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAIS
RRHGFEPPVIGVLTQVDQLAPADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG
IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPILTGMQVLMVTGIAYLAGRRL
SREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSLVSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDR
IVKKP

Sequences:

>Translated_405_residues
MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSLVNAIFGAPLAETGAVLSTTA
AGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAENLKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAIS
RRHGFEPPVIGVLTQVDQLAPADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG
IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPILTGMQVLMVTGIAYLAGRRL
SREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSLVSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDR
IVKKP
>Mature_405_residues
MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSLVNAIFGAPLAETGAVLSTTA
AGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAENLKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAIS
RRHGFEPPVIGVLTQVDQLAPADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG
IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPILTGMQVLMVTGIAYLAGRRL
SREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSLVSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDR
IVKKP

Specific function: Unknown

COG id: COG3597

COG function: function code S; Uncharacterized protein/domain associated with GTPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43586; Mature: 43586

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
VNAIFGAPLAETGAVLSTTAAGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAEN
HHHHHCCCHHHCCCHHEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
LKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAISRRHGFEPPVIGVLTQVDQLA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCC
IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPI
HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
LTGMQVLMVTGIAYLAGRRLSREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH
VSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDRIVKKP
HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSL
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
VNAIFGAPLAETGAVLSTTAAGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAEN
HHHHHCCCHHHCCCHHEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
LKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAISRRHGFEPPVIGVLTQVDQLA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCC
IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPI
HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
LTGMQVLMVTGIAYLAGRRLSREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH
VSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDRIVKKP
HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA