Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893637

Identifier: 51893637

GI number: 51893637

Start: 2682684

End: 2684210

Strand: Reverse

Name: 51893637

Synonym: STH2499

Alternate gene names: NA

Gene position: 2684210-2682684 (Counterclockwise)

Preceding gene: 51893638

Following gene: 51893636

Centisome position: 75.27

GC content: 75.97

Gene sequence:

>1527_bases
GTGGAGACCCCCTGCGGCGCCCGGGGCCAGTGCCGCAAGTGCCTGGTGCGGGTGCTGGGGGAGGCCCCGGAGCCGACGCC
CGCCGACCTGGAGCAGCTCACCCCGGCCGAACTGGCCCAGGGATTCCGGCTGTCGTGCCAGCTGCGGGTGGACCGCGACC
TGGAGGTGGCCGTGGTGCCCGCCGTCACGCTGGATCCCCGGAAGGCGCGCCTGGGCGCCCTGGCAGGACCGGCCGAGGTG
GACCCCTGGGCGCCCCTCAACCCCACCGGCCGGTCGCTGGGCTTCGCCCTGGACGTCGGCACCACCGGCATCGCCGGCGC
CCTCCTGGACCTGCGCACGGGCGAGGAGCTGGCGGTGCACGCCTCCCTGAACCCCCAGGCGGTCTACGGGGCCGACCTCA
TGACCCGCCTGTCCCACGCCATCCAGGGGGAGGAGCAGAAGGGCGAACTGACACGGCTCGTGCGGGATGCCGCGCAGGCG
CTGCTCGGCCGGCTGCTGGGCAAGGCCGGCGCCCGGCCGGAGGAGGTGACGGCCGCCTCCCTGGTGGGCAACACGGCGAT
GCACCACCTGTTCCTGGGGCTGCCGGTCGAGCAACTGGCCGTGGCCCCGTACACGCCCGCGGTCACGGAGGGACGGGTCT
TCGAGGTTCCGGGCTTCCCGGCGCTCTACGCCCTGCCCGTCATCGCCGGGTTCGTGGGGGCGGACACCGTGGCCGCGGCG
CTGGCGGCCGGGCTGGACGCGGGCGAGGAGACCGTCCTGCTGGTGGACGTGGGCACCAACGGCGAGGTCCTGCTGCGCCA
CGCCGGGCGGCTCTACGCGTGCTCGGCGCCCGCCGGCCCGGCCTTCGAGGGGGGCGAGATCAGCCAGGGGATGCGGGCCG
GTCCCGGCGCCATTGAGGCGGTGCGGTTCGACGGGCGGGACCTGGTGGTGACGGTTATCCCGGGCGGCCCGCGGTCTACG
GCCGGCGGCGGCGGCGGCTCCGGAACCGAGGCGGCCAGGGGGATCTGCGGATCGGGGCTGCTGGACGCTGCGGCGGCCCT
GCTGGAGGCCGGGCTGATGGACGAGACCGGGCGGCTCACCCATGCCGGACCCGCCGCGCACCGGCTGGCGGAGGGCGGCC
GGGCCGTTGCCCTGGCTCCCGGGGTGCAGCTCACCCAGAAGGACCTCCGGTCCCTGCAGCTGGCCAAGGGAGCGATCCGG
TCGGGCATTGAGGTGCTGCTGCGGGTGGCGGGGATCGGCCCCGCCCGGCTGGACAAGGTGCTCCTGGCCGGCGCATTCGG
CAACTACCTGCGGCGGGAGAGCGCGGTCGCCACCGGCCTCCTGCCCCCGGTGGACCCGGGGCGCATCCAGCCCATCGGGA
ACGCTGCGATCGCGGGGGCGAAGCTGGCCCTGCTCTCCCGCTCGGCCCGCGACCGCGCGGAGGCCCTGGCCCGCGGGGCC
CGCTTCGTGGAGCTGGCGACCCATCCCGACTTCGAGGAGGTCTTCATGGAGGCGCTCAACTTCCCGCGTGTCCGCCCGGG
CGCATAG

Upstream 100 bases:

>100_bases
GGGACGCAGGGTGAACGTCCAGGTGAAGGCCGCGGGCCGGACGTTTTCGGTCCCCTCGGGGATGCCGCTCGCGCGGGCGC
TGAACCAGCACGAGCCCTTC

Downstream 100 bases:

>100_bases
GTCCCGGGGTGCAGGCTCATACCAAGTCCTGCAGCAGATCGACCTCGTCCGGGAGGGAAGGCCATATGCCTGCGTCCAGG
GTTCCGGCGGCCGCCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Electron Transfer Protein; Vitamin; Corrinoid Activation/Regeneration Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Activating; Ferredoxin Domain-Containing Protein

Number of amino acids: Translated: 508; Mature: 508

Protein sequence:

>508_residues
METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVPAVTLDPRKARLGALAGPAEV
DPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVHASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQA
LLGRLLGKAGARPEEVTAASLVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA
LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEAVRFDGRDLVVTVIPGGPRST
AGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLTHAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIR
SGIEVLLRVAGIGPARLDKVLLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA
RFVELATHPDFEEVFMEALNFPRVRPGA

Sequences:

>Translated_508_residues
METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVPAVTLDPRKARLGALAGPAEV
DPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVHASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQA
LLGRLLGKAGARPEEVTAASLVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA
LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEAVRFDGRDLVVTVIPGGPRST
AGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLTHAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIR
SGIEVLLRVAGIGPARLDKVLLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA
RFVELATHPDFEEVFMEALNFPRVRPGA
>Mature_508_residues
METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVPAVTLDPRKARLGALAGPAEV
DPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVHASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQA
LLGRLLGKAGARPEEVTAASLVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA
LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEAVRFDGRDLVVTVIPGGPRST
AGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLTHAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIR
SGIEVLLRVAGIGPARLDKVLLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA
RFVELATHPDFEEVFMEALNFPRVRPGA

Specific function: Unknown

COG id: COG3894

COG function: function code R; Uncharacterized metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52126; Mature: 52126

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCEEEEEEEECCCCEEEEEE
AVTLDPRKARLGALAGPAEVDPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVH
EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEE
ASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQALLGRLLGKAGARPEEVTAAS
ECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA
HHHHHHHHHHHHCCCHHHHEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEA
HHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
VRFDGRDLVVTVIPGGPRSTAGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLT
EEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
HAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIRSGIEVLLRVAGIGPARLDKV
CCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RFVELATHPDFEEVFMEALNFPRVRPGA
EEEEECCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCEEEEEEEECCCCEEEEEE
AVTLDPRKARLGALAGPAEVDPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVH
EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEE
ASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQALLGRLLGKAGARPEEVTAAS
ECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA
HHHHHHHHHHHHCCCHHHHEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEA
HHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
VRFDGRDLVVTVIPGGPRSTAGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLT
EEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC
HAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIRSGIEVLLRVAGIGPARLDKV
CCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RFVELATHPDFEEVFMEALNFPRVRPGA
EEEEECCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA