| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893637
Identifier: 51893637
GI number: 51893637
Start: 2682684
End: 2684210
Strand: Reverse
Name: 51893637
Synonym: STH2499
Alternate gene names: NA
Gene position: 2684210-2682684 (Counterclockwise)
Preceding gene: 51893638
Following gene: 51893636
Centisome position: 75.27
GC content: 75.97
Gene sequence:
>1527_bases GTGGAGACCCCCTGCGGCGCCCGGGGCCAGTGCCGCAAGTGCCTGGTGCGGGTGCTGGGGGAGGCCCCGGAGCCGACGCC CGCCGACCTGGAGCAGCTCACCCCGGCCGAACTGGCCCAGGGATTCCGGCTGTCGTGCCAGCTGCGGGTGGACCGCGACC TGGAGGTGGCCGTGGTGCCCGCCGTCACGCTGGATCCCCGGAAGGCGCGCCTGGGCGCCCTGGCAGGACCGGCCGAGGTG GACCCCTGGGCGCCCCTCAACCCCACCGGCCGGTCGCTGGGCTTCGCCCTGGACGTCGGCACCACCGGCATCGCCGGCGC CCTCCTGGACCTGCGCACGGGCGAGGAGCTGGCGGTGCACGCCTCCCTGAACCCCCAGGCGGTCTACGGGGCCGACCTCA TGACCCGCCTGTCCCACGCCATCCAGGGGGAGGAGCAGAAGGGCGAACTGACACGGCTCGTGCGGGATGCCGCGCAGGCG CTGCTCGGCCGGCTGCTGGGCAAGGCCGGCGCCCGGCCGGAGGAGGTGACGGCCGCCTCCCTGGTGGGCAACACGGCGAT GCACCACCTGTTCCTGGGGCTGCCGGTCGAGCAACTGGCCGTGGCCCCGTACACGCCCGCGGTCACGGAGGGACGGGTCT TCGAGGTTCCGGGCTTCCCGGCGCTCTACGCCCTGCCCGTCATCGCCGGGTTCGTGGGGGCGGACACCGTGGCCGCGGCG CTGGCGGCCGGGCTGGACGCGGGCGAGGAGACCGTCCTGCTGGTGGACGTGGGCACCAACGGCGAGGTCCTGCTGCGCCA CGCCGGGCGGCTCTACGCGTGCTCGGCGCCCGCCGGCCCGGCCTTCGAGGGGGGCGAGATCAGCCAGGGGATGCGGGCCG GTCCCGGCGCCATTGAGGCGGTGCGGTTCGACGGGCGGGACCTGGTGGTGACGGTTATCCCGGGCGGCCCGCGGTCTACG GCCGGCGGCGGCGGCGGCTCCGGAACCGAGGCGGCCAGGGGGATCTGCGGATCGGGGCTGCTGGACGCTGCGGCGGCCCT GCTGGAGGCCGGGCTGATGGACGAGACCGGGCGGCTCACCCATGCCGGACCCGCCGCGCACCGGCTGGCGGAGGGCGGCC GGGCCGTTGCCCTGGCTCCCGGGGTGCAGCTCACCCAGAAGGACCTCCGGTCCCTGCAGCTGGCCAAGGGAGCGATCCGG TCGGGCATTGAGGTGCTGCTGCGGGTGGCGGGGATCGGCCCCGCCCGGCTGGACAAGGTGCTCCTGGCCGGCGCATTCGG CAACTACCTGCGGCGGGAGAGCGCGGTCGCCACCGGCCTCCTGCCCCCGGTGGACCCGGGGCGCATCCAGCCCATCGGGA ACGCTGCGATCGCGGGGGCGAAGCTGGCCCTGCTCTCCCGCTCGGCCCGCGACCGCGCGGAGGCCCTGGCCCGCGGGGCC CGCTTCGTGGAGCTGGCGACCCATCCCGACTTCGAGGAGGTCTTCATGGAGGCGCTCAACTTCCCGCGTGTCCGCCCGGG CGCATAG
Upstream 100 bases:
>100_bases GGGACGCAGGGTGAACGTCCAGGTGAAGGCCGCGGGCCGGACGTTTTCGGTCCCCTCGGGGATGCCGCTCGCGCGGGCGC TGAACCAGCACGAGCCCTTC
Downstream 100 bases:
>100_bases GTCCCGGGGTGCAGGCTCATACCAAGTCCTGCAGCAGATCGACCTCGTCCGGGAGGGAAGGCCATATGCCTGCGTCCAGG GTTCCGGCGGCCGCCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Electron Transfer Protein; Vitamin; Corrinoid Activation/Regeneration Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; ATP Synthase F0 A Subunit; Activating; Ferredoxin Domain-Containing Protein
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVPAVTLDPRKARLGALAGPAEV DPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVHASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQA LLGRLLGKAGARPEEVTAASLVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEAVRFDGRDLVVTVIPGGPRST AGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLTHAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIR SGIEVLLRVAGIGPARLDKVLLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA RFVELATHPDFEEVFMEALNFPRVRPGA
Sequences:
>Translated_508_residues METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVPAVTLDPRKARLGALAGPAEV DPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVHASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQA LLGRLLGKAGARPEEVTAASLVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEAVRFDGRDLVVTVIPGGPRST AGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLTHAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIR SGIEVLLRVAGIGPARLDKVLLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA RFVELATHPDFEEVFMEALNFPRVRPGA >Mature_508_residues METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVPAVTLDPRKARLGALAGPAEV DPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVHASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQA LLGRLLGKAGARPEEVTAASLVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEAVRFDGRDLVVTVIPGGPRST AGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLTHAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIR SGIEVLLRVAGIGPARLDKVLLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA RFVELATHPDFEEVFMEALNFPRVRPGA
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52126; Mature: 52126
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVP CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCEEEEEEEECCCCEEEEEE AVTLDPRKARLGALAGPAEVDPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVH EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEE ASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQALLGRLLGKAGARPEEVTAAS ECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA HHHHHHHHHHHHCCCHHHHEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEA HHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE VRFDGRDLVVTVIPGGPRSTAGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLT EEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC HAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIRSGIEVLLRVAGIGPARLDKV CCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RFVELATHPDFEEVFMEALNFPRVRPGA EEEEECCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure METPCGARGQCRKCLVRVLGEAPEPTPADLEQLTPAELAQGFRLSCQLRVDRDLEVAVVP CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCEEEEEEEECCCCEEEEEE AVTLDPRKARLGALAGPAEVDPWAPLNPTGRSLGFALDVGTTGIAGALLDLRTGEELAVH EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEE ASLNPQAVYGADLMTRLSHAIQGEEQKGELTRLVRDAAQALLGRLLGKAGARPEEVTAAS ECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LVGNTAMHHLFLGLPVEQLAVAPYTPAVTEGRVFEVPGFPALYALPVIAGFVGADTVAAA HHHHHHHHHHHHCCCHHHHEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LAAGLDAGEETVLLVDVGTNGEVLLRHAGRLYACSAPAGPAFEGGEISQGMRAGPGAIEA HHHCCCCCCCEEEEEEECCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE VRFDGRDLVVTVIPGGPRSTAGGGGGSGTEAARGICGSGLLDAAAALLEAGLMDETGRLT EEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCC HAGPAAHRLAEGGRAVALAPGVQLTQKDLRSLQLAKGAIRSGIEVLLRVAGIGPARLDKV CCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLAGAFGNYLRRESAVATGLLPPVDPGRIQPIGNAAIAGAKLALLSRSARDRAEALARGA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC RFVELATHPDFEEVFMEALNFPRVRPGA EEEEECCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA