Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51893617

Identifier: 51893617

GI number: 51893617

Start: 2663162

End: 2663308

Strand: Reverse

Name: 51893617

Synonym: STH2479

Alternate gene names: NA

Gene position: 2663308-2663162 (Counterclockwise)

Preceding gene: 51893618

Following gene: 51893616

Centisome position: 74.68

GC content: 64.63

Gene sequence:

>147_bases
ATGCACAAGAACATGCATACCAAGACGCAGCGACCGGCGGCGCCCCCCGAGACGGAGCGGCCTGCCGGCAAGTGCCCCCA
GGTCCACGTAGAAGAGCACGTGATCGAGGAGATCCTACGCGCAGCGGGTTTGGAGGAGCTGGACTGA

Upstream 100 bases:

>100_bases
GTCAGGTAAAGCTTGACTGCAGCAACCCCGGTGCGTTCCGGGGTTCCTTTTTTCCATTCTCATCGAGGCTCACGCAACAA
CACGAGAGGAGGCGAGAGAC

Downstream 100 bases:

>100_bases
ACGGCCGGATGGTCGGAAAGGGGGAGACGGTGCGTGCGCAGCGCGCTGGAGACGCAGCTCAGGGACCTTAACCGGGATGT
CCTGCAGATGGGCCGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MHKNMHTKTQRPAAPPETERPAGKCPQVHVEEHVIEEILRAAGLEELD

Sequences:

>Translated_48_residues
MHKNMHTKTQRPAAPPETERPAGKCPQVHVEEHVIEEILRAAGLEELD
>Mature_48_residues
MHKNMHTKTQRPAAPPETERPAGKCPQVHVEEHVIEEILRAAGLEELD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5425; Mature: 5425

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKNMHTKTQRPAAPPETERPAGKCPQVHVEEHVIEEILRAAGLEELD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHKNMHTKTQRPAAPPETERPAGKCPQVHVEEHVIEEILRAAGLEELD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA