| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is phoU [H]
Identifier: 51893616
GI number: 51893616
Start: 2662475
End: 2663128
Strand: Reverse
Name: phoU [H]
Synonym: STH2478
Alternate gene names: 51893616
Gene position: 2663128-2662475 (Counterclockwise)
Preceding gene: 51893617
Following gene: 51893612
Centisome position: 74.68
GC content: 68.35
Gene sequence:
>654_bases GTGCGCAGCGCGCTGGAGACGCAGCTCAGGGACCTTAACCGGGATGTCCTGCAGATGGGCCGGCTGGTGAGCGGGATGGT GGAGAAGGCGGTCCGTTCCCTGGCCCAGCAGGACGCGGCCCTGGCGCAGCAGGTCATTGACCAGGACGACGAGGTCGACC GGATGCTGATCGCCATCGAGATGCGCTGCCTGCAGGTCATGGCCCTGCAGCAGCCGATGGCCCGCGACCTGCGCGCCGTG GGCTCCAGCCTCAAGGTGGTCACCGACCTGGAGCGGGTGGCCGACCACGCCACCGACATCGCCGAGGTGACCCTGAAGCT GGCCGGCGAACCGCTGATCAAGCCGCTGATCGACATCCCCCGCATGGCCGACCTGGCCCAGCAGATGGTGCGGGAGGCGC TGGAGGCCTTCGTCCAGCAGGACGAGGCCGCGGCCCGTACCATGATCGCCCGGGATCACGACATGGACGACCTGTACCGG GCGGTGTTCGATGAGCTGGTGGAGATGATGGAGCGGGACCCCGGGGTCGTGCGGCAGGCGACCTACCTGCTGCACGTGGC CGGCTGGCTGGAGCGGATCGGCGACCACGCGACGAACCTGGGCGAGTGGATCATCTACCAGCTCACCGGCGAGCTGAACG ACCTGAATACGTAG
Upstream 100 bases:
>100_bases GGTCCACGTAGAAGAGCACGTGATCGAGGAGATCCTACGCGCAGCGGGTTTGGAGGAGCTGGACTGAACGGCCGGATGGT CGGAAAGGGGGAGACGGTGC
Downstream 100 bases:
>100_bases CAAGAGAGGGGGCAAGCGCCCCCTCCTTTCTCACCGTGCCGCATCCTCCCCGGCCTCCGCCCGTCGGATGGCCGACCGGG CCAGGTTGCCGATCACCACG
Product: PhoU family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MRSALETQLRDLNRDVLQMGRLVSGMVEKAVRSLAQQDAALAQQVIDQDDEVDRMLIAIEMRCLQVMALQQPMARDLRAV GSSLKVVTDLERVADHATDIAEVTLKLAGEPLIKPLIDIPRMADLAQQMVREALEAFVQQDEAAARTMIARDHDMDDLYR AVFDELVEMMERDPGVVRQATYLLHVAGWLERIGDHATNLGEWIIYQLTGELNDLNT
Sequences:
>Translated_217_residues MRSALETQLRDLNRDVLQMGRLVSGMVEKAVRSLAQQDAALAQQVIDQDDEVDRMLIAIEMRCLQVMALQQPMARDLRAV GSSLKVVTDLERVADHATDIAEVTLKLAGEPLIKPLIDIPRMADLAQQMVREALEAFVQQDEAAARTMIARDHDMDDLYR AVFDELVEMMERDPGVVRQATYLLHVAGWLERIGDHATNLGEWIIYQLTGELNDLNT >Mature_217_residues MRSALETQLRDLNRDVLQMGRLVSGMVEKAVRSLAQQDAALAQQVIDQDDEVDRMLIAIEMRCLQVMALQQPMARDLRAV GSSLKVVTDLERVADHATDIAEVTLKLAGEPLIKPLIDIPRMADLAQQMVREALEAFVQQDEAAARTMIARDHDMDDLYR AVFDELVEMMERDPGVVRQATYLLHVAGWLERIGDHATNLGEWIIYQLTGELNDLNT
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=207, Percent_Identity=28.9855072463768, Blast_Score=97, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24450; Mature: 24450
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSALETQLRDLNRDVLQMGRLVSGMVEKAVRSLAQQDAALAQQVIDQDDEVDRMLIAIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MRCLQVMALQQPMARDLRAVGSSLKVVTDLERVADHATDIAEVTLKLAGEPLIKPLIDIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC RMADLAQQMVREALEAFVQQDEAAARTMIARDHDMDDLYRAVFDELVEMMERDPGVVRQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH TYLLHVAGWLERIGDHATNLGEWIIYQLTGELNDLNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRSALETQLRDLNRDVLQMGRLVSGMVEKAVRSLAQQDAALAQQVIDQDDEVDRMLIAIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH MRCLQVMALQQPMARDLRAVGSSLKVVTDLERVADHATDIAEVTLKLAGEPLIKPLIDIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC RMADLAQQMVREALEAFVQQDEAAARTMIARDHDMDDLYRAVFDELVEMMERDPGVVRQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH TYLLHVAGWLERIGDHATNLGEWIIYQLTGELNDLNT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]