Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893607

Identifier: 51893607

GI number: 51893607

Start: 2654523

End: 2654942

Strand: Reverse

Name: 51893607

Synonym: STH2469

Alternate gene names: NA

Gene position: 2654942-2654523 (Counterclockwise)

Preceding gene: 51893608

Following gene: 51893606

Centisome position: 74.45

GC content: 65.71

Gene sequence:

>420_bases
GTGTCCAAGAAAACGCGGGTCGTCACATCGACCGCCTGCCCCGTTGACGTCTCGCGGCCGGTGGTTTCGGTTAGCTGCCC
GAAAACGGTACCCACTGCCACCGCCGGGGTGACCGACCAGTCGGATAAGAAGGGCTTCTTCGACAAGAAGGGGTTCTTCC
CGTTCTCGTTCGGCTTTGGCGGTAAGAGCGTGCCCGGGCAGGTGTTCAACAACCCGGCCGTAGACCTGGCTCCGTTCAGC
AAGCTGGCCTCGCTGGCCGCGTTCAGCCCGGCCGCGGCGCTGGCCGCCAAGAGCCCCGTGCTGGCGATCTTCAACCCGGC
GATCAACCCGGCGGCTGCGTTCCTACAATTCAACCCAGGCGCGGCGCCCACGCTGGCGCTCACCGGCAAGGGCAAGCCCT
TCGGCAAGTTCGGCATCTGA

Upstream 100 bases:

>100_bases
CCTGTAACCGAGTACGCAACGGTTACATAAGCTGAGAGCGGAGACGTTCCACCCTCGCGGTGGTGCTCATCCCGGTATAG
ATTCGGAAGGAGGTTCCTTC

Downstream 100 bases:

>100_bases
TCAACCGGACGGCAGGCTGGGGAGTCGCAGGGCTCCCCTGCTTCCGGTCAGGAGGGAAACCCCGCATGCACTTCGGCGGG
TTCGACGCACCCGACCAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFGGKSVPGQVFNNPAVDLAPFS
KLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPGAAPTLALTGKGKPFGKFGI

Sequences:

>Translated_139_residues
MSKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFGGKSVPGQVFNNPAVDLAPFS
KLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPGAAPTLALTGKGKPFGKFGI
>Mature_138_residues
SKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFGGKSVPGQVFNNPAVDLAPFSK
LASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPGAAPTLALTGKGKPFGKFGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14195; Mature: 14063

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFG
CCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
GKSVPGQVFNNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPG
CCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCEEEEEEECCC
AAPTLALTGKGKPFGKFGI
CCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFG
CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
GKSVPGQVFNNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPG
CCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCEEEEEEECCC
AAPTLALTGKGKPFGKFGI
CCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA