| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893607
Identifier: 51893607
GI number: 51893607
Start: 2654523
End: 2654942
Strand: Reverse
Name: 51893607
Synonym: STH2469
Alternate gene names: NA
Gene position: 2654942-2654523 (Counterclockwise)
Preceding gene: 51893608
Following gene: 51893606
Centisome position: 74.45
GC content: 65.71
Gene sequence:
>420_bases GTGTCCAAGAAAACGCGGGTCGTCACATCGACCGCCTGCCCCGTTGACGTCTCGCGGCCGGTGGTTTCGGTTAGCTGCCC GAAAACGGTACCCACTGCCACCGCCGGGGTGACCGACCAGTCGGATAAGAAGGGCTTCTTCGACAAGAAGGGGTTCTTCC CGTTCTCGTTCGGCTTTGGCGGTAAGAGCGTGCCCGGGCAGGTGTTCAACAACCCGGCCGTAGACCTGGCTCCGTTCAGC AAGCTGGCCTCGCTGGCCGCGTTCAGCCCGGCCGCGGCGCTGGCCGCCAAGAGCCCCGTGCTGGCGATCTTCAACCCGGC GATCAACCCGGCGGCTGCGTTCCTACAATTCAACCCAGGCGCGGCGCCCACGCTGGCGCTCACCGGCAAGGGCAAGCCCT TCGGCAAGTTCGGCATCTGA
Upstream 100 bases:
>100_bases CCTGTAACCGAGTACGCAACGGTTACATAAGCTGAGAGCGGAGACGTTCCACCCTCGCGGTGGTGCTCATCCCGGTATAG ATTCGGAAGGAGGTTCCTTC
Downstream 100 bases:
>100_bases TCAACCGGACGGCAGGCTGGGGAGTCGCAGGGCTCCCCTGCTTCCGGTCAGGAGGGAAACCCCGCATGCACTTCGGCGGG TTCGACGCACCCGACCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MSKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFGGKSVPGQVFNNPAVDLAPFS KLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPGAAPTLALTGKGKPFGKFGI
Sequences:
>Translated_139_residues MSKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFGGKSVPGQVFNNPAVDLAPFS KLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPGAAPTLALTGKGKPFGKFGI >Mature_138_residues SKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFGGKSVPGQVFNNPAVDLAPFSK LASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPGAAPTLALTGKGKPFGKFGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14195; Mature: 14063
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFG CCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC GKSVPGQVFNNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPG CCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCEEEEEEECCC AAPTLALTGKGKPFGKFGI CCCEEEEECCCCCCCCCCC >Mature Secondary Structure SKKTRVVTSTACPVDVSRPVVSVSCPKTVPTATAGVTDQSDKKGFFDKKGFFPFSFGFG CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC GKSVPGQVFNNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPAAAFLQFNPG CCCCCCHHCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCEEEEEEECCC AAPTLALTGKGKPFGKFGI CCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA