| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893606
Identifier: 51893606
GI number: 51893606
Start: 2654188
End: 2654457
Strand: Reverse
Name: 51893606
Synonym: STH2468
Alternate gene names: NA
Gene position: 2654457-2654188 (Counterclockwise)
Preceding gene: 51893607
Following gene: 51893605
Centisome position: 74.44
GC content: 68.89
Gene sequence:
>270_bases ATGCACTTCGGCGGGTTCGACGCACCCGACCAGGTCTTCTTCAACCCGGCCGTAGACCTGGCTCCGTTCAGCAAGCTGGC TTCTCTGGCCGCGTTCAGCCCGGCCGCGGCGCTGGCCGCCAAGAGCCCGGTGCTGGCCATCTTCAACCCGGCGATCAACC CGCGGGCGGCGCTGCTGGCGTTCAACCCGGCCGCCGCGCCGACGCTGGCGCTGACGGGTGGCCTGGGAGGGAAGTTCTTC AAGAAACCGTTCCGGAAGGGGTGCTGCTGA
Upstream 100 bases:
>100_bases GCAAGGGCAAGCCCTTCGGCAAGTTCGGCATCTGATCAACCGGACGGCAGGCTGGGGAGTCGCAGGGCTCCCCTGCTTCC GGTCAGGAGGGAAACCCCGC
Downstream 100 bases:
>100_bases TGCCGGAGGGGCAGGCCGGCGGGCGCACCCATACCGTAGACGACGGGGGCGGCAGGCCCCCGTTTGTTGTGCCAGGGAGG AGGTCGTGCCGCCCATGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MHFGGFDAPDQVFFNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPRAALLAFNPAAAPTLALTGGLGGKFF KKPFRKGCC
Sequences:
>Translated_89_residues MHFGGFDAPDQVFFNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPRAALLAFNPAAAPTLALTGGLGGKFF KKPFRKGCC >Mature_89_residues MHFGGFDAPDQVFFNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPRAALLAFNPAAAPTLALTGGLGGKFF KKPFRKGCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9121; Mature: 9121
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFGGFDAPDQVFFNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPRAALLA CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCEEEEE FNPAAAPTLALTGGLGGKFFKKPFRKGCC ECCCCCCEEEEECCCCCHHHHHHHHCCCC >Mature Secondary Structure MHFGGFDAPDQVFFNPAVDLAPFSKLASLAAFSPAAALAAKSPVLAIFNPAINPRAALLA CCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCHHHHHCCCCEEEEECCCCCCCEEEEE FNPAAAPTLALTGGLGGKFFKKPFRKGCC ECCCCCCEEEEECCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA