| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is argK [C]
Identifier: 51893602
GI number: 51893602
Start: 2650336
End: 2651547
Strand: Reverse
Name: argK [C]
Synonym: STH2464
Alternate gene names: 51893602
Gene position: 2651547-2650336 (Counterclockwise)
Preceding gene: 51893603
Following gene: 51893601
Centisome position: 74.35
GC content: 74.42
Gene sequence:
>1212_bases ATGAGGCCAGAGGACCGGGCTGCTGAGCTGTTCGCCCGTCTCCGCTCCGGGGACCGGCGGGCCCTCGCGCGGGCGATCAC CTGGATCGAGAACGGGGACGAGGAGGCGGTTGCGCTGTTGCGCCTGGTCTACCCGCTGACCGGGCGGGCCCACGTGGTGG GCGTCACCGGGCCGCCCGGAGCCGGCAAGTCCACCCTGGTGGACCGGCTGGCCGCCGAGCAGCGCGCCCGCGGCCGCACG GTCGCGATCGTGGCGGTGGACCCGACCAGCCCGTTCTCGGGAGGCGCCATCCTGGGCGACCGGATCCGCATGCAGCGGAC GCTGACCGACCCCGGCGTCTTCATGCGCTCCCTGGCCGCCCGGGGCCACCTGGGGGGGCTCTCGCCCGCCACCGGCGAGG TGGTGTCGGTGCTGGACGCCTTCGGCTTCGACGTGATCCTTGTGGAGACGGTGGGGGCGGGTCAGTCGGAGGTCGAGATC ATGGCCCTGGCGCACACCACCTGCGTGGTGGTGGTGCCGGGGCTGGGCGACGAGATCCAGGCGATCAAGGCCGGGATCCT GGAGATCGGCGACGTCTTCGTCTGCAACAAGGCGGACCGGGACGGTGCGGACCGGACGGTGAGCGAGATCGAGATGATGC TGGATCTGGGCCACATGGGCCGCCCGGGCATCAACCGGTGGCCGGCCGGGGAGGACGGGAACCGGAATGCTGACGCGGCG GCTGCGGGGGACCGGGCCCTGTCGCAGGACGGCGAGGGACCGTCCCTGCCGCCCGGCGCCGAGGAAGCGCTGCGCCGGCT GGACCGCACGGGCCATCACAGCGCGGAGGAACTGCGGTACGCCGCGCGCTTCATGACCCGGGCCGCGGCGCACGCGGCGG CGCGGCACGGGACGGCCAGGCCCGGGGACGTCTCCTGGCGCCCGCCGGTGGTGAAGACCGTCGCGAAGGACGGCCAGGGC GTGGACGCGGTGGTGGACCGTCTGGACGAGCACCTGGCCTTCCTGCGGGAGACCGGTCGCTGGGAGGCCCGCCGGGAGCA GGACGCGGCCCAGCGGCTGCAGGAGTTGGTGGGACAGCGGGCCGCGCAGGCTACCCTGGAGCGGGCCCGGGCCGCCGGCG ACTTCGAGGAGCTGGTGCGGCAGGTGGCCGAGCGGCGGCTCGATCCGTACACCGCCGCCGAGGAGATCATGCGCAACCAC TGGGGCCGCTGA
Upstream 100 bases:
>100_bases ACGAGGTGCCCGCCCTGCTGGAGGCCGGCGTCGCCCGGGTGTTCGGCCCGGGGTCGGACCTGGAGGAGATCATTCAGTAC ACGAGGGAGAACGTGAAGCG
Downstream 100 bases:
>100_bases GCGCCGTTGTTTTCGCACCGAGACGCCGCCGGGATCGGCCGGGCGAGCTGCCTGGCCTGGGGGCGCCGGCGTCGGGGCGA CACCGGAGCCGCTGCCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MRPEDRAAELFARLRSGDRRALARAITWIENGDEEAVALLRLVYPLTGRAHVVGVTGPPGAGKSTLVDRLAAEQRARGRT VAIVAVDPTSPFSGGAILGDRIRMQRTLTDPGVFMRSLAARGHLGGLSPATGEVVSVLDAFGFDVILVETVGAGQSEVEI MALAHTTCVVVVPGLGDEIQAIKAGILEIGDVFVCNKADRDGADRTVSEIEMMLDLGHMGRPGINRWPAGEDGNRNADAA AAGDRALSQDGEGPSLPPGAEEALRRLDRTGHHSAEELRYAARFMTRAAAHAAARHGTARPGDVSWRPPVVKTVAKDGQG VDAVVDRLDEHLAFLRETGRWEARREQDAAQRLQELVGQRAAQATLERARAAGDFEELVRQVAERRLDPYTAAEEIMRNH WGR
Sequences:
>Translated_403_residues MRPEDRAAELFARLRSGDRRALARAITWIENGDEEAVALLRLVYPLTGRAHVVGVTGPPGAGKSTLVDRLAAEQRARGRT VAIVAVDPTSPFSGGAILGDRIRMQRTLTDPGVFMRSLAARGHLGGLSPATGEVVSVLDAFGFDVILVETVGAGQSEVEI MALAHTTCVVVVPGLGDEIQAIKAGILEIGDVFVCNKADRDGADRTVSEIEMMLDLGHMGRPGINRWPAGEDGNRNADAA AAGDRALSQDGEGPSLPPGAEEALRRLDRTGHHSAEELRYAARFMTRAAAHAAARHGTARPGDVSWRPPVVKTVAKDGQG VDAVVDRLDEHLAFLRETGRWEARREQDAAQRLQELVGQRAAQATLERARAAGDFEELVRQVAERRLDPYTAAEEIMRNH WGR >Mature_403_residues MRPEDRAAELFARLRSGDRRALARAITWIENGDEEAVALLRLVYPLTGRAHVVGVTGPPGAGKSTLVDRLAAEQRARGRT VAIVAVDPTSPFSGGAILGDRIRMQRTLTDPGVFMRSLAARGHLGGLSPATGEVVSVLDAFGFDVILVETVGAGQSEVEI MALAHTTCVVVVPGLGDEIQAIKAGILEIGDVFVCNKADRDGADRTVSEIEMMLDLGHMGRPGINRWPAGEDGNRNADAA AAGDRALSQDGEGPSLPPGAEEALRRLDRTGHHSAEELRYAARFMTRAAAHAAARHGTARPGDVSWRPPVVKTVAKDGQG VDAVVDRLDEHLAFLRETGRWEARREQDAAQRLQELVGQRAAQATLERARAAGDFEELVRQVAERRLDPYTAAEEIMRNH WGR
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=210, Percent_Identity=38.0952380952381, Blast_Score=135, Evalue=7e-32, Organism=Escherichia coli, GI1789285, Length=231, Percent_Identity=37.6623376623377, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71994271, Length=235, Percent_Identity=37.0212765957447, Blast_Score=147, Evalue=7e-36, Organism=Caenorhabditis elegans, GI71994275, Length=177, Percent_Identity=37.8531073446328, Blast_Score=133, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 43387; Mature: 43387
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPEDRAAELFARLRSGDRRALARAITWIENGDEEAVALLRLVYPLTGRAHVVGVTGPPG CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCC AGKSTLVDRLAAEQRARGRTVAIVAVDPTSPFSGGAILGDRIRMQRTLTDPGVFMRSLAA CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH RGHLGGLSPATGEVVSVLDAFGFDVILVETVGAGQSEVEIMALAHTTCVVVVPGLGDEIQ CCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECEEEEEECCCCHHHH AIKAGILEIGDVFVCNKADRDGADRTVSEIEMMLDLGHMGRPGINRWPAGEDGNRNADAA HHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH AAGDRALSQDGEGPSLPPGAEEALRRLDRTGHHSAEELRYAARFMTRAAAHAAARHGTAR HHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PGDVSWRPPVVKTVAKDGQGVDAVVDRLDEHLAFLRETGRWEARREQDAAQRLQELVGQR CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAQATLERARAAGDFEELVRQVAERRLDPYTAAEEIMRNHWGR HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MRPEDRAAELFARLRSGDRRALARAITWIENGDEEAVALLRLVYPLTGRAHVVGVTGPPG CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCC AGKSTLVDRLAAEQRARGRTVAIVAVDPTSPFSGGAILGDRIRMQRTLTDPGVFMRSLAA CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH RGHLGGLSPATGEVVSVLDAFGFDVILVETVGAGQSEVEIMALAHTTCVVVVPGLGDEIQ CCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEECEEEEEECCCCHHHH AIKAGILEIGDVFVCNKADRDGADRTVSEIEMMLDLGHMGRPGINRWPAGEDGNRNADAA HHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH AAGDRALSQDGEGPSLPPGAEEALRRLDRTGHHSAEELRYAARFMTRAAAHAAARHGTAR HHCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PGDVSWRPPVVKTVAKDGQGVDAVVDRLDEHLAFLRETGRWEARREQDAAQRLQELVGQR CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AAQATLERARAAGDFEELVRQVAERRLDPYTAAEEIMRNHWGR HHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]