| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893543
Identifier: 51893543
GI number: 51893543
Start: 2589106
End: 2589381
Strand: Reverse
Name: 51893543
Synonym: STH2405
Alternate gene names: NA
Gene position: 2589381-2589106 (Counterclockwise)
Preceding gene: 51893544
Following gene: 51893542
Centisome position: 72.61
GC content: 68.12
Gene sequence:
>276_bases GTGGGGTATGCTGACCACAGGGCGGCGTTCCGCGAGGGACGTCGCCCTTTTTCGATCGCACGGCGCAGACGCGGGATCGG CCGCGTCCGTGCGCTGCCTGTGGCGTTGGCCTGCGGGTCAGCGCACCTGCCCTCCACTTCTGACCAACAGGCGCGTGATG CTTCCTCGAAGGCCCCCTTGGAGCAGCGCGTGCCGCCCGTCGGGATGCCAGATCGGATGGCCCCGTCGCTGCGGCTCACC CGCGCTGCCTTTACAGCTTACTTCGCGATTGGTTAG
Upstream 100 bases:
>100_bases CGCCCCCCCGGCACGGCCGTGGTCAGGGGACTCAGAAAGCAGCGGAGCGGGCACCCACCTGTGGAGAGCAGGTTCATTGT TCTACCGGGCACACGGCATG
Downstream 100 bases:
>100_bases AATAGGGGCTGTCAGTTGGGTGCATATACGTAAAGGAGGATGCAGAAAGTGGCCGGCGACAAGGTCGTCACGCTGTCGGC CAGCAACTGGGCCGCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MGYADHRAAFREGRRPFSIARRRRGIGRVRALPVALACGSAHLPSTSDQQARDASSKAPLEQRVPPVGMPDRMAPSLRLT RAAFTAYFAIG
Sequences:
>Translated_91_residues MGYADHRAAFREGRRPFSIARRRRGIGRVRALPVALACGSAHLPSTSDQQARDASSKAPLEQRVPPVGMPDRMAPSLRLT RAAFTAYFAIG >Mature_90_residues GYADHRAAFREGRRPFSIARRRRGIGRVRALPVALACGSAHLPSTSDQQARDASSKAPLEQRVPPVGMPDRMAPSLRLTR AAFTAYFAIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9920; Mature: 9788
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYADHRAAFREGRRPFSIARRRRGIGRVRALPVALACGSAHLPSTSDQQARDASSKAPL CCCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCH EQRVPPVGMPDRMAPSLRLTRAAFTAYFAIG HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure GYADHRAAFREGRRPFSIARRRRGIGRVRALPVALACGSAHLPSTSDQQARDASSKAPL CCCHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCH EQRVPPVGMPDRMAPSLRLTRAAFTAYFAIG HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA