Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893531

Identifier: 51893531

GI number: 51893531

Start: 2578337

End: 2578879

Strand: Reverse

Name: 51893531

Synonym: STH2393

Alternate gene names: NA

Gene position: 2578879-2578337 (Counterclockwise)

Preceding gene: 51893533

Following gene: 51893530

Centisome position: 72.32

GC content: 69.06

Gene sequence:

>543_bases
GTGCGGAGCCAGCTCGCAGCCGCCGGCCTCCGGGAACGGCTGGAGGCTGAGATCTACGACTTCGAACTGGAACTGCGGGG
CACGGACAAGTCCAACCTGCTGATCCGCCTGGACAGCTTCCGCCTGGAGATCCTGGGGGCCAGGCCGGACCTCCTCCTGC
ACAACCTGGCGGCGATCATCCTCACCGAAGCCGGCGCCTTCCGGCTGAACACGGTGGAGGTGGGCTTCACCGCCTGGCTG
AAGGCGGGCCAGGGACGGCCCCTGAACCTGGTCGCCCAGGCCTTCACCCCCGCCTGGGGGGCGGCCGAGGCCGAGTTCCT
CGACCGGCGCTTCGCCATGACCTGGGACTGGGCGACGCCCACCACCGGCTACACGTTCCACGCCAGCTCCGCGGAGGACG
AGGAGCTGATGCTGAACTTCAAGGCCCGCGAGGGCTACATGACGCTGACGGAGCTGCAGACCGGCCTCTGGATCCAGGAG
CAGCGCCAGCGGTTCGAGCAGGCGGCCCGCCTCTTCCTGAACCTGCTCGGCTGGACCCTATAG

Upstream 100 bases:

>100_bases
GAGGCGATAGCGGTTGCTGCCTGATCAGGAGCAGAGTCTGTACGTCGAGTTCGATGAACTGTTCTCGCTGCGGGAACGGC
TGCGGCCCCTGGCCGACCAG

Downstream 100 bases:

>100_bases
GCGGAGGTGACGGCCTTGCGGCGGCGCGCGAAGATCCTGCGCTTCGTGCTGACGGCGGTCCTGCTGTTCATGGTCGGCCG
CCTCGGCTGGTTCCACGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAIILTEAGAFRLNTVEVGFTAWL
KAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATPTTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQE
QRQRFEQAARLFLNLLGWTL

Sequences:

>Translated_180_residues
MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAIILTEAGAFRLNTVEVGFTAWL
KAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATPTTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQE
QRQRFEQAARLFLNLLGWTL
>Mature_180_residues
MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAIILTEAGAFRLNTVEVGFTAWL
KAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATPTTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQE
QRQRFEQAARLFLNLLGWTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20482; Mature: 20482

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAII
CCCHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHH
LTEAGAFRLNTVEVGFTAWLKAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATP
HCCCCCEEEEEEEECHHEEHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCC
TTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQEQRQRFEQAARLFLNLLGWTL
CCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAII
CCCHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHH
LTEAGAFRLNTVEVGFTAWLKAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATP
HCCCCCEEEEEEEECHHEEHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCC
TTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQEQRQRFEQAARLFLNLLGWTL
CCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA