Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893512

Identifier: 51893512

GI number: 51893512

Start: 2561359

End: 2561856

Strand: Reverse

Name: 51893512

Synonym: STH2374

Alternate gene names: NA

Gene position: 2561856-2561359 (Counterclockwise)

Preceding gene: 51893513

Following gene: 51893511

Centisome position: 71.84

GC content: 71.29

Gene sequence:

>498_bases
GTGTCTGTCGGCCTACCTGGTGTACCCACGCGTCTCCGCGGCGGAGGCCCAGCAGCGCGACCGGGTGGGCGTGCTGGTGG
CGGCCGAACCCATTCCGGCGCAGGTTCCGCTGGAGGCGCTGCACCTGAAAACGGCCAGGGCGGATTGGCGGCATGGGTGA
AGGATCGGGCCGCCGGCCTCACCGCCCTCTTCACGCTGAGTGTTCCGGTTCTGCTGGCGGTAGGCGGCGCGGCCCTGGTG
AGCGGCGCGCTCTACGAGCTGGTGGTGGGTGGCCGCTTGTTCAACTGGGTCGAAGCGGTGATCGGGTCGGTGATCGGCGG
GATCAGCGCCGGCGTGGGCGGCTGGCTGCCCGGGTCGGGATCGCAGCCACCAACATCGCGGCGGGTGGAGCGTCGAGTCT
GGTCAGCTACCTGGTCCACTCCCCGGAGCGCTCCGTCCGCGGCGCGGTGGGCGCCTTTGCCCAGGGTGGCCTCACCTCCG
GCCTGTTCATGGGTCTGA

Upstream 100 bases:

>100_bases
TGAACAATCATCCTTTCGACTCCACGGGCCCAGGGAGGTCAGCTATGCGTGAGGCCAAGCGCCACATTGCAGGATTTCTG
GTCCTGGCGTGGCTTCTGTC

Downstream 100 bases:

>100_bases
ACACCCTCACCAGCCGGTTCTGGACCTGGCGCCTGGGGACGCATGCCCCGGCGGGAGATTGGGCGAGATCCCGGAGCATG
GTGGCGGCCGCGCTTGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGLTALFTLSVPVLLAVGGAALV
SGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSGSQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPP
ACSWV

Sequences:

>Translated_165_residues
MSVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGLTALFTLSVPVLLAVGGAALV
SGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSGSQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPP
ACSWV
>Mature_164_residues
SVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGLTALFTLSVPVLLAVGGAALVS
GALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSGSQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPPA
CSWV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16294; Mature: 16163

Theoretical pI: Translated: 12.38; Mature: 12.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TALFTLSVPVLLAVGGAALVSGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPPACSWV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
TALFTLSVPVLLAVGGAALVSGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPPACSWV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA