| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893512
Identifier: 51893512
GI number: 51893512
Start: 2561359
End: 2561856
Strand: Reverse
Name: 51893512
Synonym: STH2374
Alternate gene names: NA
Gene position: 2561856-2561359 (Counterclockwise)
Preceding gene: 51893513
Following gene: 51893511
Centisome position: 71.84
GC content: 71.29
Gene sequence:
>498_bases GTGTCTGTCGGCCTACCTGGTGTACCCACGCGTCTCCGCGGCGGAGGCCCAGCAGCGCGACCGGGTGGGCGTGCTGGTGG CGGCCGAACCCATTCCGGCGCAGGTTCCGCTGGAGGCGCTGCACCTGAAAACGGCCAGGGCGGATTGGCGGCATGGGTGA AGGATCGGGCCGCCGGCCTCACCGCCCTCTTCACGCTGAGTGTTCCGGTTCTGCTGGCGGTAGGCGGCGCGGCCCTGGTG AGCGGCGCGCTCTACGAGCTGGTGGTGGGTGGCCGCTTGTTCAACTGGGTCGAAGCGGTGATCGGGTCGGTGATCGGCGG GATCAGCGCCGGCGTGGGCGGCTGGCTGCCCGGGTCGGGATCGCAGCCACCAACATCGCGGCGGGTGGAGCGTCGAGTCT GGTCAGCTACCTGGTCCACTCCCCGGAGCGCTCCGTCCGCGGCGCGGTGGGCGCCTTTGCCCAGGGTGGCCTCACCTCCG GCCTGTTCATGGGTCTGA
Upstream 100 bases:
>100_bases TGAACAATCATCCTTTCGACTCCACGGGCCCAGGGAGGTCAGCTATGCGTGAGGCCAAGCGCCACATTGCAGGATTTCTG GTCCTGGCGTGGCTTCTGTC
Downstream 100 bases:
>100_bases ACACCCTCACCAGCCGGTTCTGGACCTGGCGCCTGGGGACGCATGCCCCGGCGGGAGATTGGGCGAGATCCCGGAGCATG GTGGCGGCCGCGCTTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGLTALFTLSVPVLLAVGGAALV SGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSGSQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPP ACSWV
Sequences:
>Translated_165_residues MSVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGLTALFTLSVPVLLAVGGAALV SGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSGSQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPP ACSWV >Mature_164_residues SVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGLTALFTLSVPVLLAVGGAALVS GALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSGSQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPPA CSWV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16294; Mature: 16163
Theoretical pI: Translated: 12.38; Mature: 12.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TALFTLSVPVLLAVGGAALVSGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPPACSWV CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVGLPGVPTRLRGGGPAARPGGRAGGGRTHSGAGSAGGAAPENGQGGLAAWVKDRAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TALFTLSVPVLLAVGGAALVSGALYELVVGGRLFNWVEAVIGSVIGGISAGVGGWLPGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SQPPTSRRVERRVWSATWSTPRSAPSAARWAPLPRVASPPACSWV CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA