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The map label for this gene is 51893490

Identifier: 51893490

GI number: 51893490

Start: 2540307

End: 2540915

Strand: Reverse

Name: 51893490

Synonym: STH2352

Alternate gene names: NA

Gene position: 2540915-2540307 (Counterclockwise)

Preceding gene: 51893491

Following gene: 51893489

Centisome position: 71.25

GC content: 72.09

Gene sequence:

>609_bases
ATGCGAGACTTACTTACGGCCCTGGTGCGCCGCCTGCACGGGCTCGTGGACGACGAGACCCTGGCCCACAGCGGCCGGGT
CGCGTACCTGGCGGCGGCGCTGGGCGAGGCCCTGGGGCTTTCGCGGGAGATGACCCGAACGCTGTACCTCGGAGGCCTGC
TGCACGACATCGGAAAGGGCGTGGTCCCCGCGGAGGTGCTGCACAAGCCCGGTCGGCTTCTGCCGGAGGAACGACGGCTG
GTGGAGGCGCACGCGGCTGCCGGGGAGTCCATGGTGCTTCAGTTGGCCCCCGAAATGGCGCCGGACATCGTCGACGTGGT
CCGCCACCATCACGAGCGGCTCGACGGGAGCGGCTACCCGGACAGGCTCTGCGCCGGCGACATCTCGCCGGCGGTGCGGA
TCATCGCCGTGGCCGACGTCTACGATGCGCTGATCAACGACCGGCCCTACCGCCGGGCCCTGAGCCCCGAGGAGGCCCTG
GGGGTGCTCGACGAGGAGGTCCGGTGCGGGCGGCTGGATGCCGACGTCGTGGCGGCGCTGCGACGGGTGACGGCCGACGA
GGATGGCCTTTCCCGGGCTGCCGACGGCCGGGGAGGCCAGTGTGGGTGA

Upstream 100 bases:

>100_bases
TCCGCCGCATGATCATCCTCCCGTCGGACGTCAGGGGGGCGCCGCGCCTGTTAGGCTAAGGCGGACTTTGCGTTTCGGCG
TTCGACGTGGAGGACTGTCG

Downstream 100 bases:

>100_bases
TGTCCAGGTCCGGGGTCCGTCCCCCGGAGCTGCCTGCTGCACGCGAGGGGAGTGCGGCCGTCCGTGACGGCCGCATTGCC
GTCACCGACCCCCAGGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MRDLLTALVRRLHGLVDDETLAHSGRVAYLAAALGEALGLSREMTRTLYLGGLLHDIGKGVVPAEVLHKPGRLLPEERRL
VEAHAAAGESMVLQLAPEMAPDIVDVVRHHHERLDGSGYPDRLCAGDISPAVRIIAVADVYDALINDRPYRRALSPEEAL
GVLDEEVRCGRLDADVVAALRRVTADEDGLSRAADGRGGQCG

Sequences:

>Translated_202_residues
MRDLLTALVRRLHGLVDDETLAHSGRVAYLAAALGEALGLSREMTRTLYLGGLLHDIGKGVVPAEVLHKPGRLLPEERRL
VEAHAAAGESMVLQLAPEMAPDIVDVVRHHHERLDGSGYPDRLCAGDISPAVRIIAVADVYDALINDRPYRRALSPEEAL
GVLDEEVRCGRLDADVVAALRRVTADEDGLSRAADGRGGQCG
>Mature_202_residues
MRDLLTALVRRLHGLVDDETLAHSGRVAYLAAALGEALGLSREMTRTLYLGGLLHDIGKGVVPAEVLHKPGRLLPEERRL
VEAHAAAGESMVLQLAPEMAPDIVDVVRHHHERLDGSGYPDRLCAGDISPAVRIIAVADVYDALINDRPYRRALSPEEAL
GVLDEEVRCGRLDADVVAALRRVTADEDGLSRAADGRGGQCG

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21730; Mature: 21730

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLLTALVRRLHGLVDDETLAHSGRVAYLAAALGEALGLSREMTRTLYLGGLLHDIGKG
CHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
VVPAEVLHKPGRLLPEERRLVEAHAAAGESMVLQLAPEMAPDIVDVVRHHHERLDGSGYP
CCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHCHHHHHHHHHHHHHCCCCCCC
DRLCAGDISPAVRIIAVADVYDALINDRPYRRALSPEEALGVLDEEVRCGRLDADVVAAL
CCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH
RRVTADEDGLSRAADGRGGQCG
HHHHCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRDLLTALVRRLHGLVDDETLAHSGRVAYLAAALGEALGLSREMTRTLYLGGLLHDIGKG
CHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
VVPAEVLHKPGRLLPEERRLVEAHAAAGESMVLQLAPEMAPDIVDVVRHHHERLDGSGYP
CCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHCHHHHHHHHHHHHHCCCCCCC
DRLCAGDISPAVRIIAVADVYDALINDRPYRRALSPEEALGVLDEEVRCGRLDADVVAAL
CCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHH
RRVTADEDGLSRAADGRGGQCG
HHHHCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]