| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893489
Identifier: 51893489
GI number: 51893489
Start: 2539414
End: 2540307
Strand: Reverse
Name: 51893489
Synonym: STH2351
Alternate gene names: NA
Gene position: 2540307-2539414 (Counterclockwise)
Preceding gene: 51893490
Following gene: 51893483
Centisome position: 71.23
GC content: 76.17
Gene sequence:
>894_bases ATGTCCAGGTCCGGGGTCCGTCCCCCGGAGCTGCCTGCTGCACGCGAGGGGAGTGCGGCCGTCCGTGACGGCCGCATTGC CGTCACCGACCCCCAGGGTGACGGGCGGCCGGCTGTGCTCATCCCGGGGGACGACGTCATCCTGATGATCGAAGGCCAGC GGGTGACCCTGCCGGTCGCCGTGTTCTCGTGGCAGGACGTGCAGGTCCGGCCCCGCCGCCCGGCCTGTCCGGTGCGCGGG TTCCGGGTGGCGGTCTCGCCCGACGGCCTGTCGGCGTACCTGGAGGTGGAGGAGCAGGGGCCGCCGGGCTACCGCATCGC GGACGCAGGCCCGGCGCGCGTGCTCGCCCTCACGGCGGAGCCGCTGCCGGGCCTGCAGGCCAATCCCCGCGACGCAGACG TGCACCAGGCCCTGAGAAGGGCCGGTGTCTCAGCCGGGGTGATCCCGTCCGCCGTTGCCTACGCCCTGGCGTCCCCAGCG GCGCGCACGGTGCAGGTGACCTGGCTCCCGGAGCTGCCCGCGGCGCGCACGGTGCAGGTGACCTGGCTCCCGGAGGTGCC CGCGGCGCGCACGGTGCAGGTCACCTGGTTCCCGGAGGTGCCCGCGGCGCGCACGGTGCAGGTGACCTGGCTCCCGGAGG TGCCCGCGGCGCGCACGGTGCAGGTGACCTGGCTCCCGGAGGTGCCCGCGGCGCGCACGGTGCAGGTAACCTGGCTCCCG GAGGTGCCCGCGGCGCACACGGTGCAGGTGACCTGGCTCCCGGAGGTGCCCGCGGCGCGCACGGTACAGGTGGCCTGGCT CCCGGAGGTGCCCGCGGCGCGCACGGTGCAGGTGGCCTGGCTCCCGGACGTGCCTGCGCCGCCTGCGGTTACTCGCAGGC GGCGCGACCGGTGA
Upstream 100 bases:
>100_bases GGCGGCTGGATGCCGACGTCGTGGCGGCGCTGCGACGGGTGACGGCCGACGAGGATGGCCTTTCCCGGGCTGCCGACGGC CGGGGAGGCCAGTGTGGGTG
Downstream 100 bases:
>100_bases CCAGCCGGGCGAACGCGCACTCGTCCGTGCCGGGGTACACCACCAGCCGGTTCAGCCGCAGCGGGTCGTGGTCCTGTGTC ACATGGCCGTGGTGGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSRSGVRPPELPAAREGSAAVRDGRIAVTDPQGDGRPAVLIPGDDVILMIEGQRVTLPVAVFSWQDVQVRPRRPACPVRG FRVAVSPDGLSAYLEVEEQGPPGYRIADAGPARVLALTAEPLPGLQANPRDADVHQALRRAGVSAGVIPSAVAYALASPA ARTVQVTWLPELPAARTVQVTWLPEVPAARTVQVTWFPEVPAARTVQVTWLPEVPAARTVQVTWLPEVPAARTVQVTWLP EVPAAHTVQVTWLPEVPAARTVQVAWLPEVPAARTVQVAWLPDVPAPPAVTRRRRDR
Sequences:
>Translated_297_residues MSRSGVRPPELPAAREGSAAVRDGRIAVTDPQGDGRPAVLIPGDDVILMIEGQRVTLPVAVFSWQDVQVRPRRPACPVRG FRVAVSPDGLSAYLEVEEQGPPGYRIADAGPARVLALTAEPLPGLQANPRDADVHQALRRAGVSAGVIPSAVAYALASPA ARTVQVTWLPELPAARTVQVTWLPEVPAARTVQVTWFPEVPAARTVQVTWLPEVPAARTVQVTWLPEVPAARTVQVTWLP EVPAAHTVQVTWLPEVPAARTVQVAWLPEVPAARTVQVAWLPDVPAPPAVTRRRRDR >Mature_296_residues SRSGVRPPELPAAREGSAAVRDGRIAVTDPQGDGRPAVLIPGDDVILMIEGQRVTLPVAVFSWQDVQVRPRRPACPVRGF RVAVSPDGLSAYLEVEEQGPPGYRIADAGPARVLALTAEPLPGLQANPRDADVHQALRRAGVSAGVIPSAVAYALASPAA RTVQVTWLPELPAARTVQVTWLPEVPAARTVQVTWFPEVPAARTVQVTWLPEVPAARTVQVTWLPEVPAARTVQVTWLPE VPAAHTVQVTWLPEVPAARTVQVAWLPEVPAARTVQVAWLPDVPAPPAVTRRRRDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31953; Mature: 31822
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSGVRPPELPAAREGSAAVRDGRIAVTDPQGDGRPAVLIPGDDVILMIEGQRVTLPVA CCCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCEEEECCCCEEEEEECCEEEEEEE VFSWQDVQVRPRRPACPVRGFRVAVSPDGLSAYLEVEEQGPPGYRIADAGPARVLALTAE EEEECCCEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCCCEEEEEEECC PLPGLQANPRDADVHQALRRAGVSAGVIPSAVAYALASPAARTVQVTWLPELPAARTVQV CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE TWLPEVPAARTVQVTWFPEVPAARTVQVTWLPEVPAARTVQVTWLPEVPAARTVQVTWLP EECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECC EVPAAHTVQVTWLPEVPAARTVQVAWLPEVPAARTVQVAWLPDVPAPPAVTRRRRDR CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCCC >Mature Secondary Structure SRSGVRPPELPAAREGSAAVRDGRIAVTDPQGDGRPAVLIPGDDVILMIEGQRVTLPVA CCCCCCCCCCCCCCCCCCEEECCEEEEECCCCCCCCEEEECCCCEEEEEECCEEEEEEE VFSWQDVQVRPRRPACPVRGFRVAVSPDGLSAYLEVEEQGPPGYRIADAGPARVLALTAE EEEECCCEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCEEEECCCCEEEEEEECC PLPGLQANPRDADVHQALRRAGVSAGVIPSAVAYALASPAARTVQVTWLPELPAARTVQV CCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEEE TWLPEVPAARTVQVTWFPEVPAARTVQVTWLPEVPAARTVQVTWLPEVPAARTVQVTWLP EECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECC EVPAAHTVQVTWLPEVPAARTVQVAWLPEVPAARTVQVAWLPDVPAPPAVTRRRRDR CCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA