Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893433

Identifier: 51893433

GI number: 51893433

Start: 2475664

End: 2477322

Strand: Reverse

Name: 51893433

Synonym: STH2295

Alternate gene names: NA

Gene position: 2477322-2475664 (Counterclockwise)

Preceding gene: 51893440

Following gene: 51893432

Centisome position: 69.47

GC content: 61.42

Gene sequence:

>1659_bases
ATGGTGGGAGTGTGGCCGCTCCCAATCCACCATGTGGAGGTTCGACTGATGCAGTCTCATGGTACGACACCCAACATCGC
TGCGCAAGCCATCAAGTCCACCACCCGACATGGTTTTCTCGTCGCTCTTGGCTGGGTAGCTCAAAGGCTCAACCTGGTTG
AGATCCTGAATCGGCACCTGCGCATCAAGCAGAAGACCTACGCCCACACGCCGGTTGACAAGGTGGTCGAGGCGTTGGTT
GCCATTCTCGGCAACTGTCGCTACATGAAGGATCTCAACTTCGACCCTGAGCCGCTGGTTGCCGATCCTGCCGTAGCTCA
AGCCTGGGGGCAGGAACGCTTTGCTCACTTTTCCACCGTCTGTGCGACCTTCAGCAAGCTGACGGAGGAGAACGTTCAGC
AGCTTTCCGACGCACTCGCTGAGATCCAGGCCCCGCTGCTTCAGCAGGAGGTGGCTGCCGTAGCAGGTCCAGACCGCTCC
GGAATGGTCATCGTCGACATTGACCTCACCGGCCAGAAGGTTCGGGGCGAGACCAGGCAGTACACCGGTACCGACTTCGG
CTACATCCAGGGGAAGTTGGCCCGAGGCTATCAGATCGCAGCCGCCTTCCTCAGCGGGAAGCAGCAGCGCTTTGCCATCG
ACGGCCTTCTCAAGTCCGGCAAGGCCAACAGCCGTTCCGGCGCCTGCCTGCTCGAACTGATTCCCAGGATCGAAGCCCGG
ATTGGTCGTCCCCTGCGGCGAGTCGAATGGGTCGAGGCATGCCTGGCTCAGCAGAAGGCTCGGGTCAGGCAGCTGTATCA
GCAACTGCAGACGGTATCAGGCAAGGGCAGCGCCCGCCGGAAGCAGAAGCTGCAGCGTGAGTTCCAGGAGGAGGTTCAGC
ACCTCCGTGAAGTGAACCAGCGACTCCGGCAGTACCGGCAGGAGAATCGGACGAACCTGGCTCCCCTCCGTATTCTGCTG
CGAGCTGACAGCGCCTTTGGCACGCCGGAAGTGATCCAGCGCCTGCTGGAACTGGGGTATGAGTTCACCATCAAGTCCTA
CTCCGGAAGCAATCCCGCCTACAAGCGCCTCTTCGACGCCGTGCCGGCGGAGGGCTGGGTTGAAGTCGAGAAGAACCGGT
TTGCCTCCGAAGCCGTTACCGTACCTGGCCCCACTTTGCTCGCACCGTATCCGGTGCGACTGGTCGCCATGCGCCGCTGG
GACGCCGATGGCCGGGAGGTCCGCAGCGTCATCCTGACTACGCTCCAGCCTGAGGAGCTCACCACGACAGAGGTCGTCAA
GCTCTACCATGGACGGCAGACCATCGAAGCCGGGTTCCAGGAGTGGAAGGGAACGTTCCACTTTGGTACTCCTCGGATGC
GGAAGTATGAGGCCAACGCCGCCTTCACGCAGCTGGTCTTGTTCGCCTTCAACCTGGTGCGCTGGGCTTGGCGGTTTCTG
AGCACGAACTCGCCCAAACTGGCCGAGGCGGGGAGTCGACTCTTGGTACGAGTAGCGGCCCGGTGCCGAGCAACCATTCG
GTGCCTCGGCGACACGCTGCGGTTGGTGTTCAGCCGGGGTACTCCCCTGGCTGGAGCTGAGATTACCCTGAACCGGGCCA
CTCCCTACCCATACGCCCTTTTAACACCACGAATGTCGAGTTGTTCGCGTGAAACTTGA

Upstream 100 bases:

>100_bases
TGGAAGAAACGGGGGCACGCTAGCTCAAGTTTCGCGTGAATAACCCGGACTTCGTGCAATGGAAACCCATTGAAAAAGCA
TCAGTCAGAACCAATGATAC

Downstream 100 bases:

>100_bases
GCTAGGGACAAGGAAGGGAGGGAGGTGCTTCCGGAGGCCCCGCGGGAGGGGTATTTTATATAAGGGGTGTTCCGGTGAGG
CCGGAACATCTCCCCGATCA

Product: transposase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MVGVWPLPIHHVEVRLMQSHGTTPNIAAQAIKSTTRHGFLVALGWVAQRLNLVEILNRHLRIKQKTYAHTPVDKVVEALV
AILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRS
GMVIVDIDLTGQKVRGETRQYTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEAR
IGRPLRRVEWVEACLAQQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNLAPLRILL
RADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRW
DADGREVRSVILTTLQPEELTTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFL
STNSPKLAEAGSRLLVRVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET

Sequences:

>Translated_552_residues
MVGVWPLPIHHVEVRLMQSHGTTPNIAAQAIKSTTRHGFLVALGWVAQRLNLVEILNRHLRIKQKTYAHTPVDKVVEALV
AILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRS
GMVIVDIDLTGQKVRGETRQYTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEAR
IGRPLRRVEWVEACLAQQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNLAPLRILL
RADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRW
DADGREVRSVILTTLQPEELTTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFL
STNSPKLAEAGSRLLVRVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET
>Mature_552_residues
MVGVWPLPIHHVEVRLMQSHGTTPNIAAQAIKSTTRHGFLVALGWVAQRLNLVEILNRHLRIKQKTYAHTPVDKVVEALV
AILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRS
GMVIVDIDLTGQKVRGETRQYTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEAR
IGRPLRRVEWVEACLAQQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQRLRQYRQENRTNLAPLRILL
RADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRW
DADGREVRSVILTTLQPEELTTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFL
STNSPKLAEAGSRLLVRVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYALLTPRMSSCSRET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62143; Mature: 62143

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGVWPLPIHHVEVRLMQSHGTTPNIAAQAIKSTTRHGFLVALGWVAQRLNLVEILNRHL
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RIKQKTYAHTPVDKVVEALVAILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTV
HHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
CATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRGETRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCC
YTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEAR
CCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
IGRPLRRVEWVEACLAQQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLRQYRQENRTNLAPLRILLRADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDA
HHHHHHHHCCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
VPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRWDADGREVRSVILTTLQPEEL
CCCCCCEEEHHHHHHHCCEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
TTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFL
HHHHHHHHHHCHHHHHHHHHHCCCEEECCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHH
STNSPKLAEAGSRLLVRVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEE
LTPRMSSCSRET
ECCCHHCCCCCC
>Mature Secondary Structure
MVGVWPLPIHHVEVRLMQSHGTTPNIAAQAIKSTTRHGFLVALGWVAQRLNLVEILNRHL
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
RIKQKTYAHTPVDKVVEALVAILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTV
HHHHHHHCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
CATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRGETRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCC
YTGTDFGYIQGKLARGYQIAAAFLSGKQQRFAIDGLLKSGKANSRSGACLLELIPRIEAR
CCCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
IGRPLRRVEWVEACLAQQKARVRQLYQQLQTVSGKGSARRKQKLQREFQEEVQHLREVNQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLRQYRQENRTNLAPLRILLRADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDA
HHHHHHHHCCCCHHHHHHEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
VPAEGWVEVEKNRFASEAVTVPGPTLLAPYPVRLVAMRRWDADGREVRSVILTTLQPEEL
CCCCCCEEEHHHHHHHCCEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCC
TTTEVVKLYHGRQTIEAGFQEWKGTFHFGTPRMRKYEANAAFTQLVLFAFNLVRWAWRFL
HHHHHHHHHHCHHHHHHHHHHCCCEEECCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHH
STNSPKLAEAGSRLLVRVAARCRATIRCLGDTLRLVFSRGTPLAGAEITLNRATPYPYAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEE
LTPRMSSCSRET
ECCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA