Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893398

Identifier: 51893398

GI number: 51893398

Start: 2427025

End: 2428176

Strand: Reverse

Name: 51893398

Synonym: STH2260

Alternate gene names: NA

Gene position: 2428176-2427025 (Counterclockwise)

Preceding gene: 51893399

Following gene: 51893397

Centisome position: 68.09

GC content: 65.02

Gene sequence:

>1152_bases
ATGCTGCACCCAGATGCATTGACGGGCATCAAGGAGCAGATCATCCGGCTCGCGGAGGCCGACCGCGCCCTGTTGGACGA
CCTGCGCCGGGAGGTGAGGGACCTCGCCGGCAGCGTCAGGGTGATTCGGCCCCGCAGTTCTACCGCGATCTCACTGGTGG
CCAGCGACGGCGGCAACAACAAGCTTGTGTTCGACCCCTTCTACGTGCAGGTGGTACGGGTGGTGGACTCGTACGGCAAG
GAGCTGCTGGTAGACGTCGTCTCGCCGACCACTGACCCCGACTCCTTGTTGACGAATCACTTCACCCCGTCGGGGGACCC
GAAATCGGCCCTGGGCCGGCTGATGGCCGACCTGGGGGTGAGGAGCCTGTCCGCGCTCAGCCACATGATTCCGGACAGCA
GGCGGGTGCGGGAGCGCCCGGAAACGGTGAGCCCCTCCTGGGTGCAGGTCTACCGCGATATCTGTGAGTGGGCGGTGCTT
TATGAGCGCATCTGTTACCAGACCTTTGCCTCCGACACGCTGATTGTGCGGGACGGCCTGCTCCGCTCCAAGGTCTTCCG
CGGCGAGGGCTTCATCCGGATGCGGGAGCGGATGGAGGAGGCCATCGAGCGGGTGTGGCGGCAGGACCGCCGGCGCATCT
ATCTGGTGGGGCTGGCCAAGCACAGCCAGGTGCTGAACCGGTATGGCCTTGCGATGGCCATTGAAGAGACCCTCCCCGCC
GGCGATGCCCGCTACGTGGCGATTCCCCGGGAGTTGGAAGCCAAGGCCTACAAGTGGCAGGAGTGGGCACGTGGTGCCGA
GACTGAGGAGGGGGAGGCCCCAAAGTTTGTGGCCGGCGACATGTTCTTCGTCCGCTTCGGGCCGCACTCGGGCGATCCCG
TCTGGGCTGTGGACATTTTCTCGGCCCAGCGTGACCGGGCGGACGAGATACTCGGCCACCTGCTGGCAGATGCCCGGGAC
GGTTTTCCTGTGCCGTATTATCCTCGCTGTCTCCAGCGGGCGCACGAGCACGCACAGCTAGCTGACTTCGACTGGGCGAT
CCTGCAGGACCAGATCCTGGATGCTGTACGGGGGCTGCTCCCCCGCGAAAAGCAGTTCCTGCTCGATGCATACAGACTCA
GGGCAGACGTGACGGGAGAGAGGTACGGATGA

Upstream 100 bases:

>100_bases
GGCATCCCGCCGCGGCACCGGCGCCAGGCCGTACAGTTTGAGAAAACCCGCCCGGCTCACGAGGAGATCGACCTCGTGGC
CGTCTTGGGGGAGTGAATCG

Downstream 100 bases:

>100_bases
CGCTTTTTCCGCGAGACCAGGTAGTGGGCATCTTTCGCGGCTTCAGCCAGGGCGGTATGGAGTTTCACGCCGACTTGGTG
CTGCCGTACCGGAGCGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MLHPDALTGIKEQIIRLAEADRALLDDLRREVRDLAGSVRVIRPRSSTAISLVASDGGNNKLVFDPFYVQVVRVVDSYGK
ELLVDVVSPTTDPDSLLTNHFTPSGDPKSALGRLMADLGVRSLSALSHMIPDSRRVRERPETVSPSWVQVYRDICEWAVL
YERICYQTFASDTLIVRDGLLRSKVFRGEGFIRMRERMEEAIERVWRQDRRRIYLVGLAKHSQVLNRYGLAMAIEETLPA
GDARYVAIPRELEAKAYKWQEWARGAETEEGEAPKFVAGDMFFVRFGPHSGDPVWAVDIFSAQRDRADEILGHLLADARD
GFPVPYYPRCLQRAHEHAQLADFDWAILQDQILDAVRGLLPREKQFLLDAYRLRADVTGERYG

Sequences:

>Translated_383_residues
MLHPDALTGIKEQIIRLAEADRALLDDLRREVRDLAGSVRVIRPRSSTAISLVASDGGNNKLVFDPFYVQVVRVVDSYGK
ELLVDVVSPTTDPDSLLTNHFTPSGDPKSALGRLMADLGVRSLSALSHMIPDSRRVRERPETVSPSWVQVYRDICEWAVL
YERICYQTFASDTLIVRDGLLRSKVFRGEGFIRMRERMEEAIERVWRQDRRRIYLVGLAKHSQVLNRYGLAMAIEETLPA
GDARYVAIPRELEAKAYKWQEWARGAETEEGEAPKFVAGDMFFVRFGPHSGDPVWAVDIFSAQRDRADEILGHLLADARD
GFPVPYYPRCLQRAHEHAQLADFDWAILQDQILDAVRGLLPREKQFLLDAYRLRADVTGERYG
>Mature_383_residues
MLHPDALTGIKEQIIRLAEADRALLDDLRREVRDLAGSVRVIRPRSSTAISLVASDGGNNKLVFDPFYVQVVRVVDSYGK
ELLVDVVSPTTDPDSLLTNHFTPSGDPKSALGRLMADLGVRSLSALSHMIPDSRRVRERPETVSPSWVQVYRDICEWAVL
YERICYQTFASDTLIVRDGLLRSKVFRGEGFIRMRERMEEAIERVWRQDRRRIYLVGLAKHSQVLNRYGLAMAIEETLPA
GDARYVAIPRELEAKAYKWQEWARGAETEEGEAPKFVAGDMFFVRFGPHSGDPVWAVDIFSAQRDRADEILGHLLADARD
GFPVPYYPRCLQRAHEHAQLADFDWAILQDQILDAVRGLLPREKQFLLDAYRLRADVTGERYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43610; Mature: 43610

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHPDALTGIKEQIIRLAEADRALLDDLRREVRDLAGSVRVIRPRSSTAISLVASDGGNN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCC
KLVFDPFYVQVVRVVDSYGKELLVDVVSPTTDPDSLLTNHFTPSGDPKSALGRLMADLGV
CEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RSLSALSHMIPDSRRVRERPETVSPSWVQVYRDICEWAVLYERICYQTFASDTLIVRDGL
HHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH
LRSKVFRGEGFIRMRERMEEAIERVWRQDRRRIYLVGLAKHSQVLNRYGLAMAIEETLPA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCC
GDARYVAIPRELEAKAYKWQEWARGAETEEGEAPKFVAGDMFFVRFGPHSGDPVWAVDIF
CCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEEEEH
SAQRDRADEILGHLLADARDGFPVPYYPRCLQRAHEHAQLADFDWAILQDQILDAVRGLL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PREKQFLLDAYRLRADVTGERYG
CCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLHPDALTGIKEQIIRLAEADRALLDDLRREVRDLAGSVRVIRPRSSTAISLVASDGGNN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCC
KLVFDPFYVQVVRVVDSYGKELLVDVVSPTTDPDSLLTNHFTPSGDPKSALGRLMADLGV
CEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH
RSLSALSHMIPDSRRVRERPETVSPSWVQVYRDICEWAVLYERICYQTFASDTLIVRDGL
HHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHH
LRSKVFRGEGFIRMRERMEEAIERVWRQDRRRIYLVGLAKHSQVLNRYGLAMAIEETLPA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCC
GDARYVAIPRELEAKAYKWQEWARGAETEEGEAPKFVAGDMFFVRFGPHSGDPVWAVDIF
CCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEEEEEH
SAQRDRADEILGHLLADARDGFPVPYYPRCLQRAHEHAQLADFDWAILQDQILDAVRGLL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PREKQFLLDAYRLRADVTGERYG
CCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA