Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893385

Identifier: 51893385

GI number: 51893385

Start: 2411743

End: 2413758

Strand: Reverse

Name: 51893385

Synonym: STH2247

Alternate gene names: NA

Gene position: 2413758-2411743 (Counterclockwise)

Preceding gene: 51893386

Following gene: 51893384

Centisome position: 67.69

GC content: 71.08

Gene sequence:

>2016_bases
GTGATCCACGATCGAGGACGAGATATTGTCGTGGTGACGGATCGACCCAACTACCCTGGGGAAGAGAACCGGCCAGTAGG
GCGGCCCCTATGCTCTCGCAGCCACGGCAAGGTGTGGGTGGTGCAGGGGCTCGACCGGCCGAGTGACATGGTCCGATGGC
AGTACTATGAGGCAGAGACCACGAAACAAGATGAAAGCGGCTTCGGCGGCTTCATCACGCCCTCCGCCGTCATGGCTCCG
CCCCACGGGAGCAACCCCAGCTTTGTCATCGGCACCGATGGCTTTGAGGGAGGGCGCGCGCTGCGGCTGGCCCTGGACCG
CGACAACGACTATCGCCCTTACCGGGTCTGGACAGTCGACAGTACCGCCGGCTTCGCCGGCAACTTCACCTCAGACGGCA
CCCACGCGTACTGGTTGGACACCCGGGGGCGTCTCTGGGGCGCCAATCTGCATGACGGGCTGGAGCCCGCCGGCTGGAAA
GGGCACATGGTCGACGTCCCCGCCCTCATCGGCGCCAGGAACGCCTTCACCAACACCGAACCCGCGGTCGAGGTCCGCCA
GACCCCCGACGGCCCCAAGACCCACCTCTACGTCACCCTCCGCAACTACACCGACACCGGCGCGGGCCTCCGGGACGGCC
CGACCGGCAGCGACGGCGCCGTCGTGGCGCTGGGCCCCGGCGGCGAACTGAAGTGGTACCGCAAGTTCGGCCCGGCGGAC
CGGCTGGGCGAGCGGATGGCCTCCCTCAACACCGCACCGCTGGCCCTGATCAGCCGGGGCGCACTCATCTTCGGCGACGT
GAGCGGCCACATCTACAGCTACGCCCTGGACACCGGCCAGCCGATGGGCGGCGACGGGCGGCCCGCGCTCATCCAGCCGG
AAGGGCGGGCGCCCACGGACCGGCTGTTCCTGCTGAAGGACGACGAGCAGCCGAACACCGGCCCCTACAACTTCTCCCAG
GTCTCAGGCGTCGGCGTCGATCCCGCCTTCGCCTACGGCCTGCTGCTCGTCGGCGTCAACTACACCGACGCTTCCGGGGC
CTCCGGCCGGCTGGTGGCCTACCGGGCCGGCGAGGCCTACGACCTGCGGTGGCTGGATGAACCGGGGCCCCTGGAGCTGG
AGCCGGGCAAGACAGTCGCCCTGCAGCCCCGGCTGCAGCTGGAGCTGACGGCCCGGCCCCTGGCCGCGCTCTGCCCGGGC
CCGCTGTCCGTCGAGTGGTTCCTCACCGACGAGAGCGGCAAGCTGGTGCGGTCCCTGGGGACGGCGCCGCTGCCCGGCGA
CCTGGCGCCGCAGCAGCCCCACCCGGTGCCGCTGACCGTCGCCCTGACAGAGACCGACCCGGCGGAGGGGCAGATCATCC
GCGTCATCGACCTGCCCTCCGTGTACGCCCTCAGCGCGCCGCACACGGCCAACCCGAAGGTGGCGGCGGCCCGGGGCCTC
GCGGCGGCGCTGGGGCTTCCGGCCGAGAAGAGCTGCGCCGGTGCGGCGGCCGAGGTGGTGGAGCGGGAGGGGGAGCCGGG
GCCGGAGGGCGGCCTGGCCAACAACGTGCTGATCGTGCCGTACCGCAACCCGCAGCCGCCCGATGAGCCTGAGCGTCCGG
GCGAGGAGGGCGGAGGCGGGAAAATGATCATCGACGACCCGTGGGTGGCGGAGCTGGCGGTGCCGGAGGTGGCCGAGGCA
GGCCGGCCGTTTGAGGTCGGGATCTACCTGGGTTACCAGAACAACCTGGGTCAGGACGAGATCCGGGTGTCGCTCCGGCT
GTGGGCGCGGCCTGCGGGGGGCGCATCACCGCCCCCGGACGTGTGGCAGATGGTGACGATCGACAAGGTGCCCTGCTGCA
GCCTGAAGCCGGGGACGATCCCGGGGCTGAGCGCGGGCACCTGGGAGATCGTCGCCGAGATCGACTACCCGGAGGACACC
CGGCCGGAGAACAACCGCGTGATCCGCCGGGTGGAGGTGCTCTCGTCCAAGCCTGTGGAGGTGGGCGGCCCGGAGGGAGG
GGCGATCACGGACTGA

Upstream 100 bases:

>100_bases
CGGAACCAGCTATGGTTGGTTGTGGGCCTACCATACCAAGGAAAGATGGTATCGACCGGCTGAACTGGACCTGGGTTGTC
CCATCGTGGGTTCACCACTG

Downstream 100 bases:

>100_bases
TCCCGCACGCCCCAACCCCCGGCGCGGGCGGCCCGCACGCCCGGGCCGCGCCCAGCACGGGGCGGCATGAGCGACTGTAC
CCATGCGCTACACGGGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MIHDRGRDIVVVTDRPNYPGEENRPVGRPLCSRSHGKVWVVQGLDRPSDMVRWQYYEAETTKQDESGFGGFITPSAVMAP
PHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTSDGTHAYWLDTRGRLWGANLHDGLEPAGWK
GHMVDVPALIGARNAFTNTEPAVEVRQTPDGPKTHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELKWYRKFGPAD
RLGERMASLNTAPLALISRGALIFGDVSGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQPNTGPYNFSQ
VSGVGVDPAFAYGLLLVGVNYTDASGASGRLVAYRAGEAYDLRWLDEPGPLELEPGKTVALQPRLQLELTARPLAALCPG
PLSVEWFLTDESGKLVRSLGTAPLPGDLAPQQPHPVPLTVALTETDPAEGQIIRVIDLPSVYALSAPHTANPKVAAARGL
AAALGLPAEKSCAGAAAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKMIIDDPWVAELAVPEVAEA
GRPFEVGIYLGYQNNLGQDEIRVSLRLWARPAGGASPPPDVWQMVTIDKVPCCSLKPGTIPGLSAGTWEIVAEIDYPEDT
RPENNRVIRRVEVLSSKPVEVGGPEGGAITD

Sequences:

>Translated_671_residues
MIHDRGRDIVVVTDRPNYPGEENRPVGRPLCSRSHGKVWVVQGLDRPSDMVRWQYYEAETTKQDESGFGGFITPSAVMAP
PHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTSDGTHAYWLDTRGRLWGANLHDGLEPAGWK
GHMVDVPALIGARNAFTNTEPAVEVRQTPDGPKTHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELKWYRKFGPAD
RLGERMASLNTAPLALISRGALIFGDVSGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQPNTGPYNFSQ
VSGVGVDPAFAYGLLLVGVNYTDASGASGRLVAYRAGEAYDLRWLDEPGPLELEPGKTVALQPRLQLELTARPLAALCPG
PLSVEWFLTDESGKLVRSLGTAPLPGDLAPQQPHPVPLTVALTETDPAEGQIIRVIDLPSVYALSAPHTANPKVAAARGL
AAALGLPAEKSCAGAAAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKMIIDDPWVAELAVPEVAEA
GRPFEVGIYLGYQNNLGQDEIRVSLRLWARPAGGASPPPDVWQMVTIDKVPCCSLKPGTIPGLSAGTWEIVAEIDYPEDT
RPENNRVIRRVEVLSSKPVEVGGPEGGAITD
>Mature_671_residues
MIHDRGRDIVVVTDRPNYPGEENRPVGRPLCSRSHGKVWVVQGLDRPSDMVRWQYYEAETTKQDESGFGGFITPSAVMAP
PHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTSDGTHAYWLDTRGRLWGANLHDGLEPAGWK
GHMVDVPALIGARNAFTNTEPAVEVRQTPDGPKTHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELKWYRKFGPAD
RLGERMASLNTAPLALISRGALIFGDVSGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQPNTGPYNFSQ
VSGVGVDPAFAYGLLLVGVNYTDASGASGRLVAYRAGEAYDLRWLDEPGPLELEPGKTVALQPRLQLELTARPLAALCPG
PLSVEWFLTDESGKLVRSLGTAPLPGDLAPQQPHPVPLTVALTETDPAEGQIIRVIDLPSVYALSAPHTANPKVAAARGL
AAALGLPAEKSCAGAAAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKMIIDDPWVAELAVPEVAEA
GRPFEVGIYLGYQNNLGQDEIRVSLRLWARPAGGASPPPDVWQMVTIDKVPCCSLKPGTIPGLSAGTWEIVAEIDYPEDT
RPENNRVIRRVEVLSSKPVEVGGPEGGAITD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71695; Mature: 71695

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHDRGRDIVVVTDRPNYPGEENRPVGRPLCSRSHGKVWVVQGLDRPSDMVRWQYYEAET
CCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEEEECCC
TKQDESGFGGFITPSAVMAPPHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVD
CCCCCCCCCCEECCCEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEC
STAGFAGNFTSDGTHAYWLDTRGRLWGANLHDGLEPAGWKGHMVDVPALIGARNAFTNTE
CCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCC
PAVEVRQTPDGPKTHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELKWYRKFGPAD
CCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHH
RLGERMASLNTAPLALISRGALIFGDVSGHIYSYALDTGQPMGGDGRPALIQPEGRAPTD
HHHHHHHHCCCCCCHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCC
RLFLLKDDEQPNTGPYNFSQVSGVGVDPAFAYGLLLVGVNYTDASGASGRLVAYRAGEAY
EEEEEECCCCCCCCCCCHHHCCCCCCCHHHHEEEEEEEECCCCCCCCCCCEEEEECCCEE
DLRWLDEPGPLELEPGKTVALQPRLQLELTARPLAALCPGPLSVEWFLTDESGKLVRSLG
EEEECCCCCCEEECCCCEEEECCCEEEEEECCCHHHHCCCCCEEEEEEECCCCHHHHHHC
TAPLPGDLAPQQPHPVPLTVALTETDPAEGQIIRVIDLPSVYALSAPHTANPKVAAARGL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHH
AAALGLPAEKSCAGAAAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGG
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
KMIIDDPWVAELAVPEVAEAGRPFEVGIYLGYQNNLGQDEIRVSLRLWARPAGGASPPPD
EEEECCCCEEECCCCHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCC
VWQMVTIDKVPCCSLKPGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPVE
CEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHCCCCCE
VGGPEGGAITD
ECCCCCCCCCC
>Mature Secondary Structure
MIHDRGRDIVVVTDRPNYPGEENRPVGRPLCSRSHGKVWVVQGLDRPSDMVRWQYYEAET
CCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCEEEEEEECCC
TKQDESGFGGFITPSAVMAPPHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVD
CCCCCCCCCCEECCCEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEC
STAGFAGNFTSDGTHAYWLDTRGRLWGANLHDGLEPAGWKGHMVDVPALIGARNAFTNTE
CCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCC
PAVEVRQTPDGPKTHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELKWYRKFGPAD
CCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHH
RLGERMASLNTAPLALISRGALIFGDVSGHIYSYALDTGQPMGGDGRPALIQPEGRAPTD
HHHHHHHHCCCCCCHHHCCCEEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCC
RLFLLKDDEQPNTGPYNFSQVSGVGVDPAFAYGLLLVGVNYTDASGASGRLVAYRAGEAY
EEEEEECCCCCCCCCCCHHHCCCCCCCHHHHEEEEEEEECCCCCCCCCCCEEEEECCCEE
DLRWLDEPGPLELEPGKTVALQPRLQLELTARPLAALCPGPLSVEWFLTDESGKLVRSLG
EEEECCCCCCEEECCCCEEEECCCEEEEEECCCHHHHCCCCCEEEEEEECCCCHHHHHHC
TAPLPGDLAPQQPHPVPLTVALTETDPAEGQIIRVIDLPSVYALSAPHTANPKVAAARGL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHH
AAALGLPAEKSCAGAAAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGG
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
KMIIDDPWVAELAVPEVAEAGRPFEVGIYLGYQNNLGQDEIRVSLRLWARPAGGASPPPD
EEEECCCCEEECCCCHHHHCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCC
VWQMVTIDKVPCCSLKPGTIPGLSAGTWEIVAEIDYPEDTRPENNRVIRRVEVLSSKPVE
CEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEHHCCCCCE
VGGPEGGAITD
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA