Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893364

Identifier: 51893364

GI number: 51893364

Start: 2392311

End: 2393792

Strand: Reverse

Name: 51893364

Synonym: STH2226

Alternate gene names: NA

Gene position: 2393792-2392311 (Counterclockwise)

Preceding gene: 51893365

Following gene: 51893363

Centisome position: 67.13

GC content: 70.65

Gene sequence:

>1482_bases
ATGCCGCCTCGCGCCGTCACCGCCGAGATGCCCGAGGCCAACTACCTCATCGGCCATCCCGACGGCAAGTACTACCGGCT
GCTGATGCGCTGTTTCTACGAGCGGAGCCTCAGCCACATCACCTACGTGCGCACCGACGACCTGGTCGCCTTCGTACAGC
AGTACCTTCCTTACGATGATGCGACTTGCCGCCAGCACCTGGACCAGATGGAGAAGTGGGGGCTGGTCACCCTCATCCCC
GAACAGAGCAAGCCGGCCAACCTGATGGAGCTGCGGCAGAAGCCGCGCGTCTACCAGGCCAGCCGGATCGCCCTGCGGCT
GGAGGCCCTGCGGGCGGAGCTGGAGCAGGAGGAGGGTGCGGCCTCCCTGGATCCCGCTGCGCTGGATCTGCTGGTGCAGC
GGGTGCGGGAGCTCGCGGACTTCATCGAGCAGGATGGCCTCCACCGCGATGGTGCGGCGCCTGAGGCGCACCGGCTCTGG
GCAGGCGTCTACGAGTCGTTCGGCGCCTTCTCCCGGCGAATTCGGGAGTACCTGGAGGACCTGCCCCGCCACCGGCCCAG
GGAGGTGCTCGACTACGAGGCGTTCCGCGCCTACCGGGACCTCCTCATCCCGTACCTGCAGGACTATGCCAGGCGCCTGT
TCGACCGGCGGGAGCAGCTGCGGATGCGGCTCCGCGTGCTGGCGAGGAGCAAGGAACTGCTGGCGACCACGGCGGCAGTG
GTCGAGGCGCAGCAGGTGCGGGCCGACGGTTCCCGCCCCGACTTCGACCGGCAGAAGGAGCGGTTCCTGCGGGAGATCGA
CGCCCTGATCGGCTACTTCGGCGACCAGGGCGACGTGGACGTGCTGCTGGAGCGGGCCCAGGCGTGGGTGTCGGAGATCA
CCCGGCACGCGCGCCGTCTGTCCGAACAGCATCTGGGCGGCTCTGTACGTGAGCAGACGCTCCTGGACCTCGCCCGGCGC
TTCAGCGAATGCACATCGCTGGAGCAGGCCGAGAGCCTGGCCCAGGTGGTCTTCGCCGCCACCCTTCCCCTGCACTGGCG
GGGCGAGGCGCCGCCGCCGGCGGACAAAGACCCGTGGGAGGCCGAGCCGGTGACCGTGCCGCTTTACGCCGTGCGGCGCG
GGCAGCGCCCGCGCCAGCAGCCCGAGGCGACTGCGGACCGCACCAGCGAGGCCCTGCAGAAGATGCTGTCCGCCAAGGCC
GAGCGGGACCGGGCCGCCCAGGAGCTGGCCGAGCTCTTCGGCGACGAAAGCGAGCTGGACCTGGGCGACCTGACCGTCCG
CGAGCCTCGCCAGCGGCAGCTGCTGCTCCGCCTGCTCTACAAGGCCCTGTCCCAGCAGGGGCCGGTCGGCGTGGGCTACC
GGAACTGGAGCGTGACCGCCGAGGTGAAGGCCGACGCCCCGCTGGGCCGGCTGTCCGCCGCCGACGGCACGGCCACCCTT
CCGCACGTCATCCTGCGGCTGCACAAAGGGGGTCCGCGCTGA

Upstream 100 bases:

>100_bases
ATCGTGCGGATCGTCTCGGTCACGGCACCTGCCAGCAGGATCCGGAGGACGCGACGGGGAAACTCGATCGATAACACCAG
AACCATGAAGAGGTGACCTC

Downstream 100 bases:

>100_bases
TGGCCACCACCGGCGCCGCCGAACAGCGGCAGCTTGCCCTGCAGGACCTGATGGACCGCTACCTGATCAGCCAGGCCGAC
GAGCCCGAGGCCTACCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MPPRAVTAEMPEANYLIGHPDGKYYRLLMRCFYERSLSHITYVRTDDLVAFVQQYLPYDDATCRQHLDQMEKWGLVTLIP
EQSKPANLMELRQKPRVYQASRIALRLEALRAELEQEEGAASLDPAALDLLVQRVRELADFIEQDGLHRDGAAPEAHRLW
AGVYESFGAFSRRIREYLEDLPRHRPREVLDYEAFRAYRDLLIPYLQDYARRLFDRREQLRMRLRVLARSKELLATTAAV
VEAQQVRADGSRPDFDRQKERFLREIDALIGYFGDQGDVDVLLERAQAWVSEITRHARRLSEQHLGGSVREQTLLDLARR
FSECTSLEQAESLAQVVFAATLPLHWRGEAPPPADKDPWEAEPVTVPLYAVRRGQRPRQQPEATADRTSEALQKMLSAKA
ERDRAAQELAELFGDESELDLGDLTVREPRQRQLLLRLLYKALSQQGPVGVGYRNWSVTAEVKADAPLGRLSAADGTATL
PHVILRLHKGGPR

Sequences:

>Translated_493_residues
MPPRAVTAEMPEANYLIGHPDGKYYRLLMRCFYERSLSHITYVRTDDLVAFVQQYLPYDDATCRQHLDQMEKWGLVTLIP
EQSKPANLMELRQKPRVYQASRIALRLEALRAELEQEEGAASLDPAALDLLVQRVRELADFIEQDGLHRDGAAPEAHRLW
AGVYESFGAFSRRIREYLEDLPRHRPREVLDYEAFRAYRDLLIPYLQDYARRLFDRREQLRMRLRVLARSKELLATTAAV
VEAQQVRADGSRPDFDRQKERFLREIDALIGYFGDQGDVDVLLERAQAWVSEITRHARRLSEQHLGGSVREQTLLDLARR
FSECTSLEQAESLAQVVFAATLPLHWRGEAPPPADKDPWEAEPVTVPLYAVRRGQRPRQQPEATADRTSEALQKMLSAKA
ERDRAAQELAELFGDESELDLGDLTVREPRQRQLLLRLLYKALSQQGPVGVGYRNWSVTAEVKADAPLGRLSAADGTATL
PHVILRLHKGGPR
>Mature_492_residues
PPRAVTAEMPEANYLIGHPDGKYYRLLMRCFYERSLSHITYVRTDDLVAFVQQYLPYDDATCRQHLDQMEKWGLVTLIPE
QSKPANLMELRQKPRVYQASRIALRLEALRAELEQEEGAASLDPAALDLLVQRVRELADFIEQDGLHRDGAAPEAHRLWA
GVYESFGAFSRRIREYLEDLPRHRPREVLDYEAFRAYRDLLIPYLQDYARRLFDRREQLRMRLRVLARSKELLATTAAVV
EAQQVRADGSRPDFDRQKERFLREIDALIGYFGDQGDVDVLLERAQAWVSEITRHARRLSEQHLGGSVREQTLLDLARRF
SECTSLEQAESLAQVVFAATLPLHWRGEAPPPADKDPWEAEPVTVPLYAVRRGQRPRQQPEATADRTSEALQKMLSAKAE
RDRAAQELAELFGDESELDLGDLTVREPRQRQLLLRLLYKALSQQGPVGVGYRNWSVTAEVKADAPLGRLSAADGTATLP
HVILRLHKGGPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56446; Mature: 56315

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRAVTAEMPEANYLIGHPDGKYYRLLMRCFYERSLSHITYVRTDDLVAFVQQYLPYDD
CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCC
ATCRQHLDQMEKWGLVTLIPEQSKPANLMELRQKPRVYQASRIALRLEALRAELEQEEGA
HHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
ASLDPAALDLLVQRVRELADFIEQDGLHRDGAAPEAHRLWAGVYESFGAFSRRIREYLED
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRHRPREVLDYEAFRAYRDLLIPYLQDYARRLFDRREQLRMRLRVLARSKELLATTAAV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAQQVRADGSRPDFDRQKERFLREIDALIGYFGDQGDVDVLLERAQAWVSEITRHARRL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SEQHLGGSVREQTLLDLARRFSECTSLEQAESLAQVVFAATLPLHWRGEAPPPADKDPWE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
AEPVTVPLYAVRRGQRPRQQPEATADRTSEALQKMLSAKAERDRAAQELAELFGDESELD
CCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LGDLTVREPRQRQLLLRLLYKALSQQGPVGVGYRNWSVTAEVKADAPLGRLSAADGTATL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
PHVILRLHKGGPR
HHHHHHHHCCCCC
>Mature Secondary Structure 
PPRAVTAEMPEANYLIGHPDGKYYRLLMRCFYERSLSHITYVRTDDLVAFVQQYLPYDD
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCCCC
ATCRQHLDQMEKWGLVTLIPEQSKPANLMELRQKPRVYQASRIALRLEALRAELEQEEGA
HHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
ASLDPAALDLLVQRVRELADFIEQDGLHRDGAAPEAHRLWAGVYESFGAFSRRIREYLED
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRHRPREVLDYEAFRAYRDLLIPYLQDYARRLFDRREQLRMRLRVLARSKELLATTAAV
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAQQVRADGSRPDFDRQKERFLREIDALIGYFGDQGDVDVLLERAQAWVSEITRHARRL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SEQHLGGSVREQTLLDLARRFSECTSLEQAESLAQVVFAATLPLHWRGEAPPPADKDPWE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
AEPVTVPLYAVRRGQRPRQQPEATADRTSEALQKMLSAKAERDRAAQELAELFGDESELD
CCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LGDLTVREPRQRQLLLRLLYKALSQQGPVGVGYRNWSVTAEVKADAPLGRLSAADGTATL
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
PHVILRLHKGGPR
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA