Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893321

Identifier: 51893321

GI number: 51893321

Start: 2338783

End: 2339478

Strand: Reverse

Name: 51893321

Synonym: STH2183

Alternate gene names: NA

Gene position: 2339478-2338783 (Counterclockwise)

Preceding gene: 51893322

Following gene: 51893319

Centisome position: 65.6

GC content: 63.65

Gene sequence:

>696_bases
GTGCCACTTCAGGTTCTGCGCGCAAGCGGGCTCCGGAGCCTCGTCCACGCGCAGAATCTGGAGTTCGGCTCGGGCTATCA
CTACAGGTTCTGCGCGGGTGAAGCGGGTGGAGAGGCCGGCTGCGCGCAAAACCTGAGGTTCGTTCGCGAGTGCCACTTCT
GGTTCTGCGCGCAGGAGGGCTCCGGAACCTCGTCCACGCGCAAAATCTGCGGTTCGGCTCGGGCTATCACCTCAGGTTCT
GCGCGGGTGAGGCTGCTGAAGAGGCCGGCCGCGCGCAAAACCTGCGGTTCGTTCCCGAGCACCACTTCAGGTTCTGCGCG
CAAGAAAGCTCCGGAACCTCGCCCACGCGCAGAATCTGCAGTTCGGTTCGGGCTATCACTTCAGGTTTTGCGCGCAAGAG
GGCTCCGGAGCCTCGTCCACGCGCAGAATCTGGAGTTCGGCTCGGGCTATCACTACAGGTTCTGCGCGGGTGAAGCGGGT
GGGGGCGTCGTGCACGCGAACAACCTACGGTTCGATCCCGAGAGCCACTTCAGGTTCTGCGCGCATGGGGCCTCTGGAAC
CTGGCTGACGCGCAGAATCTGCAGTTGGGCCTGGACCACCGGTTCACGTTTTGCGCGCAAGCGGGATGCGGTACGTTGCC
CACGCGTAAAATCTGCAGTTCGGCTCGGGCCATCACTTCAGGTTCTGCGCGGCTGA

Upstream 100 bases:

>100_bases
CGCAGAATCTGGAGTTCCGCTCGGGCTATCACTACAGGTTCTGCGCGGGTGAGGCGGCTGGAGAGGACGGCTGCGCGCAA
AACCTGCGGTTCGTTCGCGA

Downstream 100 bases:

>100_bases
AGCGGCTGGGGGCGTCGTTGGCGCGCAGAACCTGCGGTTCAGTCCCGAGTGCCACTTCAGGTTTTGCGCGCGAGAGAGTT
CCTGGACCTCGCCCACGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MPLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEGSGTSSTRKICGSARAITSGS
ARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESAVRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAG
GGVVHANNLRFDPESHFRFCAHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG

Sequences:

>Translated_231_residues
MPLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEGSGTSSTRKICGSARAITSGS
ARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESAVRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAG
GGVVHANNLRFDPESHFRFCAHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG
>Mature_230_residues
PLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEGSGTSSTRKICGSARAITSGSA
RVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESAVRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAGG
GVVHANNLRFDPESHFRFCAHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25229; Mature: 25098

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEG
CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCC
SGTSSTRKICGSARAITSGSARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESA
CCCHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
VRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAGGGVVHANNLRFDPESHFRFC
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHEEE
AHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG
ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEECCC
>Mature Secondary Structure 
PLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEG
CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCC
SGTSSTRKICGSARAITSGSARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESA
CCCHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
VRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAGGGVVHANNLRFDPESHFRFC
HHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHEEE
AHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG
ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA