| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893321
Identifier: 51893321
GI number: 51893321
Start: 2338783
End: 2339478
Strand: Reverse
Name: 51893321
Synonym: STH2183
Alternate gene names: NA
Gene position: 2339478-2338783 (Counterclockwise)
Preceding gene: 51893322
Following gene: 51893319
Centisome position: 65.6
GC content: 63.65
Gene sequence:
>696_bases GTGCCACTTCAGGTTCTGCGCGCAAGCGGGCTCCGGAGCCTCGTCCACGCGCAGAATCTGGAGTTCGGCTCGGGCTATCA CTACAGGTTCTGCGCGGGTGAAGCGGGTGGAGAGGCCGGCTGCGCGCAAAACCTGAGGTTCGTTCGCGAGTGCCACTTCT GGTTCTGCGCGCAGGAGGGCTCCGGAACCTCGTCCACGCGCAAAATCTGCGGTTCGGCTCGGGCTATCACCTCAGGTTCT GCGCGGGTGAGGCTGCTGAAGAGGCCGGCCGCGCGCAAAACCTGCGGTTCGTTCCCGAGCACCACTTCAGGTTCTGCGCG CAAGAAAGCTCCGGAACCTCGCCCACGCGCAGAATCTGCAGTTCGGTTCGGGCTATCACTTCAGGTTTTGCGCGCAAGAG GGCTCCGGAGCCTCGTCCACGCGCAGAATCTGGAGTTCGGCTCGGGCTATCACTACAGGTTCTGCGCGGGTGAAGCGGGT GGGGGCGTCGTGCACGCGAACAACCTACGGTTCGATCCCGAGAGCCACTTCAGGTTCTGCGCGCATGGGGCCTCTGGAAC CTGGCTGACGCGCAGAATCTGCAGTTGGGCCTGGACCACCGGTTCACGTTTTGCGCGCAAGCGGGATGCGGTACGTTGCC CACGCGTAAAATCTGCAGTTCGGCTCGGGCCATCACTTCAGGTTCTGCGCGGCTGA
Upstream 100 bases:
>100_bases CGCAGAATCTGGAGTTCCGCTCGGGCTATCACTACAGGTTCTGCGCGGGTGAGGCGGCTGGAGAGGACGGCTGCGCGCAA AACCTGCGGTTCGTTCGCGA
Downstream 100 bases:
>100_bases AGCGGCTGGGGGCGTCGTTGGCGCGCAGAACCTGCGGTTCAGTCCCGAGTGCCACTTCAGGTTTTGCGCGCGAGAGAGTT CCTGGACCTCGCCCACGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MPLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEGSGTSSTRKICGSARAITSGS ARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESAVRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAG GGVVHANNLRFDPESHFRFCAHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG
Sequences:
>Translated_231_residues MPLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEGSGTSSTRKICGSARAITSGS ARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESAVRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAG GGVVHANNLRFDPESHFRFCAHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG >Mature_230_residues PLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEGSGTSSTRKICGSARAITSGSA RVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESAVRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAGG GVVHANNLRFDPESHFRFCAHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25229; Mature: 25098
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEG CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCC SGTSSTRKICGSARAITSGSARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESA CCCHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH VRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAGGGVVHANNLRFDPESHFRFC HHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHEEE AHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEECCC >Mature Secondary Structure PLQVLRASGLRSLVHAQNLEFGSGYHYRFCAGEAGGEAGCAQNLRFVRECHFWFCAQEG CHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEECCC SGTSSTRKICGSARAITSGSARVRLLKRPAARKTCGSFPSTTSGSARKKAPEPRPRAESA CCCHHHHHHHCCHHHCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH VRFGLSLQVLRARGLRSLVHAQNLEFGSGYHYRFCAGEAGGGVVHANNLRFDPESHFRFC HHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHEEE AHGASGTWLTRRICSWAWTTGSRFARKRDAVRCPRVKSAVRLGPSLQVLRG ECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA