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The map label for this gene is ugpA [H]

Identifier: 51893319

GI number: 51893319

Start: 2333879

End: 2334808

Strand: Reverse

Name: ugpA [H]

Synonym: STH2181

Alternate gene names: 51893319

Gene position: 2334808-2333879 (Counterclockwise)

Preceding gene: 51893321

Following gene: 51893318

Centisome position: 65.47

GC content: 65.91

Gene sequence:

>930_bases
TTGGCCAGCCAACCTGCGCCGGCGACCCGGGCCCGACCGCGGGCTCCGGCACGTCCAGGCTTCCGCAGGGCGGAGCGGTT
GGAGCCGTACCTGTACCTTACCCCCAGCCTGGCGCTGCTCACCATCTTCACCTTCTACCCGATCGTGCGCTCGATCTACC
TCAGCCTGTTCCTGACCAATCCGCGGGGCGAGCCCAGGGTCTTCGTCGGGCTTGAGCACTACGTGAACGCCCTGCAGTCC
ACGTTCCTGCAGAGCCTGGGCGTGACGGTCCTCTTCGTCCTCTACACCGTGCCCGCCGGGCTATTGCTCGGCCTGGTCCT
GGCTCTCCTCGCCTACCAGCCCCTGAAGGGAACCCGGATCTTCCAGCTGATCTTCTCCTCGCCGCTGGCCATCTCGGCCG
CCATCGGCAGCACGATCTGGGTCATGATGCTCAACCCGGTGTCCGGCATGGTCAACTACCTGCTCAGCCTGGTCGGCATC
GCACCGGTGCACTGGCTCACCGATCCGCGCTGGGCCCTGCTGGCCGTGGGCATGGTCAGCATCTGGCTGCGGCTTGGCTT
CAACTTCGTCCTGCTGCTCAGCGGCCTCCAGAACGTCCCGGAGGAGCTGCACGAAGCCGCCCTGGTGGACGGCGCCGGCT
TCTGGGCGAAGACGTGGCACATCACCCTGCCGATGCTTTCGCCGACGCTCTTCTTCGCCGCCGTGGTCGGGGTGATTCAC
GCTTTCCAGGTGTTCGCTGAGATCGAAATCATGACCGCCGGCGGACCGTCCGACGCCACCAACACGGTGGTCTACCGCAT
CTACCAGGTGGCCTTCCGGCAATACGAGTTCGGCGCCGCCAGCGCGCAGGCGATGCTGCTGTTCATCGTGATGGTCGTCC
TGACCTACCTCCAGTTCCGGCTCGGCGAAAGGCGGGTGCACTACCAGTGA

Upstream 100 bases:

>100_bases
TGTTTAGTGTATGTTGAGTTAAGATTCGAAGTACCGAGGAGGAGTCTGGACGCGCAGGAGGAAATATACTCGGAGCACCA
CTGCGAAGGGAGGAACGCGT

Downstream 100 bases:

>100_bases
GCGTCCAGTCCCGTCTCACCCGGCTGCTGCTGTATGCGGCCCTCTGCCTGGCGGCCCTCTTCATGGTGTTCCCCATCCTC
TACGCGGTGTCCATCAGCCT

Product: glycerol-3-phosphate ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MASQPAPATRARPRAPARPGFRRAERLEPYLYLTPSLALLTIFTFYPIVRSIYLSLFLTNPRGEPRVFVGLEHYVNALQS
TFLQSLGVTVLFVLYTVPAGLLLGLVLALLAYQPLKGTRIFQLIFSSPLAISAAIGSTIWVMMLNPVSGMVNYLLSLVGI
APVHWLTDPRWALLAVGMVSIWLRLGFNFVLLLSGLQNVPEELHEAALVDGAGFWAKTWHITLPMLSPTLFFAAVVGVIH
AFQVFAEIEIMTAGGPSDATNTVVYRIYQVAFRQYEFGAASAQAMLLFIVMVVLTYLQFRLGERRVHYQ

Sequences:

>Translated_309_residues
MASQPAPATRARPRAPARPGFRRAERLEPYLYLTPSLALLTIFTFYPIVRSIYLSLFLTNPRGEPRVFVGLEHYVNALQS
TFLQSLGVTVLFVLYTVPAGLLLGLVLALLAYQPLKGTRIFQLIFSSPLAISAAIGSTIWVMMLNPVSGMVNYLLSLVGI
APVHWLTDPRWALLAVGMVSIWLRLGFNFVLLLSGLQNVPEELHEAALVDGAGFWAKTWHITLPMLSPTLFFAAVVGVIH
AFQVFAEIEIMTAGGPSDATNTVVYRIYQVAFRQYEFGAASAQAMLLFIVMVVLTYLQFRLGERRVHYQ
>Mature_308_residues
ASQPAPATRARPRAPARPGFRRAERLEPYLYLTPSLALLTIFTFYPIVRSIYLSLFLTNPRGEPRVFVGLEHYVNALQST
FLQSLGVTVLFVLYTVPAGLLLGLVLALLAYQPLKGTRIFQLIFSSPLAISAAIGSTIWVMMLNPVSGMVNYLLSLVGIA
PVHWLTDPRWALLAVGMVSIWLRLGFNFVLLLSGLQNVPEELHEAALVDGAGFWAKTWHITLPMLSPTLFFAAVVGVIHA
FQVFAEIEIMTAGGPSDATNTVVYRIYQVAFRQYEFGAASAQAMLLFIVMVVLTYLQFRLGERRVHYQ

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=297, Percent_Identity=33.3333333333333, Blast_Score=165, Evalue=4e-42,
Organism=Escherichia coli, GI1790465, Length=237, Percent_Identity=29.957805907173, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787570, Length=258, Percent_Identity=28.6821705426357, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34319; Mature: 34188

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQPAPATRARPRAPARPGFRRAERLEPYLYLTPSLALLTIFTFYPIVRSIYLSLFLTN
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHEEC
PRGEPRVFVGLEHYVNALQSTFLQSLGVTVLFVLYTVPAGLLLGLVLALLAYQPLKGTRI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FQLIFSSPLAISAAIGSTIWVMMLNPVSGMVNYLLSLVGIAPVHWLTDPRWALLAVGMVS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHH
IWLRLGFNFVLLLSGLQNVPEELHEAALVDGAGFWAKTWHITLPMLSPTLFFAAVVGVIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH
AFQVFAEIEIMTAGGPSDATNTVVYRIYQVAFRQYEFGAASAQAMLLFIVMVVLTYLQFR
HHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LGERRVHYQ
HCCCCCCCC
>Mature Secondary Structure 
ASQPAPATRARPRAPARPGFRRAERLEPYLYLTPSLALLTIFTFYPIVRSIYLSLFLTN
CCCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHEEC
PRGEPRVFVGLEHYVNALQSTFLQSLGVTVLFVLYTVPAGLLLGLVLALLAYQPLKGTRI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
FQLIFSSPLAISAAIGSTIWVMMLNPVSGMVNYLLSLVGIAPVHWLTDPRWALLAVGMVS
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHH
IWLRLGFNFVLLLSGLQNVPEELHEAALVDGAGFWAKTWHITLPMLSPTLFFAAVVGVIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHH
AFQVFAEIEIMTAGGPSDATNTVVYRIYQVAFRQYEFGAASAQAMLLFIVMVVLTYLQFR
HHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LGERRVHYQ
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]