Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893252

Identifier: 51893252

GI number: 51893252

Start: 2256420

End: 2257013

Strand: Reverse

Name: 51893252

Synonym: STH2114

Alternate gene names: NA

Gene position: 2257013-2256420 (Counterclockwise)

Preceding gene: 51893253

Following gene: 51893250

Centisome position: 63.29

GC content: 71.89

Gene sequence:

>594_bases
GTGGCCGCGCTGACGACGGTGGTCCTGGCGGGGTGTGCGGCGACCGGCGCCGTCGCGGAGCGGCAGGCGGAGCAGAAGCA
GGACGTGGCTGCGGAGCGGGTGGCGACCGACGGCGGCGGAGCGGCGCCCTTCCGGGATGGGCAGTCCGTCCTTGCGGAGG
ACCGGGAGGAAGGGCGGCCGTCAGAGGAGGAGTCGGGGCTCGACGGCGAGTCGGCCGTCCGGGCCGTGGTCGAGGAGTTC
GGCCGCAGGCTGAAGTCCGTCTCCCTGTCGGCCCCGGACGAGGTGGTGGCCAGGAGCCTGCCGGAGCAGTACGGCGACCT
GGTCTCGCCCGAGCTGTTGGAGCGCTGGCAGCACAACCCGTCCGGCGCGCCGGGGCGGGTGGTCTCCAGCCCCTGGCCGG
ATCACATCGAGATCCAGAGCGTCACCCTGCGGGCCGACGGCGCCTACGAAGTCGAAGGGTGGATCGTGGAGATGACGAGT
GTGGAGTTGGTGAAGGGCGGTTACGCCGCCAAGCGGCCGGTTACCCTGGTGGTGGCGCGGACCGACGAGGGATGGCGGAT
CACCGACTTCGCGCTGGGTGAATACACGGCATGA

Upstream 100 bases:

>100_bases
CGGGCCCTTCGGGAAACAATGGGACTGCCAGCGCCGTCCAACCAGTCGAACGTCGAAGTTGCAGGGGGGGTGCACCGTGA
GACGCTGGTGTGCAGCTTGG

Downstream 100 bases:

>100_bases
ATCGCCGGGGGCCGCACCCGTTGGGGTGCGGCCCCGTGCGCGAGCGACCTCAGTCGTTCCCCCGAATCAGCCGCTCCGGG
ACCGTGAGCAGCCGGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRPSEEESGLDGESAVRAVVEEF
GRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNPSGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTS
VELVKGGYAAKRPVTLVVARTDEGWRITDFALGEYTA

Sequences:

>Translated_197_residues
MAALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRPSEEESGLDGESAVRAVVEEF
GRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNPSGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTS
VELVKGGYAAKRPVTLVVARTDEGWRITDFALGEYTA
>Mature_196_residues
AALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRPSEEESGLDGESAVRAVVEEFG
RRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNPSGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTSV
ELVKGGYAAKRPVTLVVARTDEGWRITDFALGEYTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21049; Mature: 20918

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
SEEESGLDGESAVRAVVEEFGRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNP
CCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
SGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTSVELVKGGYAAKRPVTLVVAR
CCCCCCCCCCCCCCCEEEEEEEEECCCCEEECEEEEEECHHHHHHCCCCCCCCEEEEEEE
TDEGWRITDFALGEYTA
CCCCCEEEEEECCCCCC
>Mature Secondary Structure 
AALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
SEEESGLDGESAVRAVVEEFGRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNP
CCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC
SGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTSVELVKGGYAAKRPVTLVVAR
CCCCCCCCCCCCCCCEEEEEEEEECCCCEEECEEEEEECHHHHHHCCCCCCCCEEEEEEE
TDEGWRITDFALGEYTA
CCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA