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The map label for this gene is 51893222

Identifier: 51893222

GI number: 51893222

Start: 2220629

End: 2222005

Strand: Reverse

Name: 51893222

Synonym: STH2084

Alternate gene names: NA

Gene position: 2222005-2220629 (Counterclockwise)

Preceding gene: 51893223

Following gene: 51893221

Centisome position: 62.31

GC content: 59.11

Gene sequence:

>1377_bases
GTGTCCAATGTCTTCATCATGAGCAAGAAGACGTATCGACCGTATCAGCCCAATCAGCTGTTGCTGCTGCCCCCTGCCCT
GCAGGACTGGCTTCCGCATGACCATTTCGCTTATTTCCTGAGTGATGTCGTGGACTCACTCGATCTAAGCCAAATCGAAC
GGACATACGAGCGAGAGCTGCGAGGTTACCCACCGTACCATCCGCGGATGATGGTCAAGGTGCTGCTGTACGCCTACTGC
AACGGCGTCTACTCCTCTCGCAAGATCGAACGCCGGCTGCAGGAGGACGTAGCCTTCCGCGTCCTTGCGGCCAACAATCA
GCCAGATTTCCGGACGATCAGCGATTTCCGGAAGCGGCATCTAAAGGCCCTCTCCGACCTGTTCCTGCAAGTGGTCAAGA
TCTGCAAGAAGGCCGGGCTGGTTCGCCTGGGTCATGTGGCCCTGGACGGCACCAAGATCAAGGCCAACGCCTCCAAGCAC
AAGGCGATGAGCTACAGCCGGATGGTGGAGGAAGAACAACGCCTGAAGGCGGAGATCGCAGAGCTGCTCCAGAAAGCCGA
GGAAGCTGACCAGGCCGAGGATGATCGCTTCGGCCCGCATCGTCGTGGGGATGAACTGCCCGAAGAACTCCGCTTCCGTG
AGCAGCGGCTGGCCAAGATTCAAGAGGCCAAGGCTGCACTGGAAGGCGAAGCGCGTCTGAGGGCCGGAGTTGACGAACAT
GAGCCTCCCGAAGGGCCCGAGCCCAAGGGGTCCAAGGGGGGCCGTCGGCGGAAGCAGCGGAAGGCAGAACCTGCTCCGAC
AGCGCAGCGCAACTTTACGGATCCCGATTCCCGGATCATGAAAGGCTCTGACAAGCAGTTCATCCAGGGATACAACGCAC
AAGCCGTCGTCGATGCCGATACGCAGATCATCGTAGCCGCTGCCGTAACAAACCAGGCGGCAGATGCTCCGCACTTGATC
CCCATGATGGAACAGGTCGAAGCCAATGTCGATGAGATGCCGGAGGAGGTTTCTGCCGATGCAGGGTACTTCAGTGAGCA
AAATGTTCAGTGGCTGTTGCAGCGGCGAATTAATCCCTACATTCCTCCGGAGAAGCAGCGACACAGCGAACGTCGGCGTG
CGAAATCACCACGCGGCCCGATTCCCAAGGGAGCAACGCTTCGGGATCGGATGCGGCGGAAACTGCAGCTAAAGCGACAC
GCCGAGCGCTACCGGAAGCGAGAGCAAAGCGTTGAGCCGGTCTTCGGGCAGATCAAGGAGGCTCGTGGTTTCCGGCAGTT
CCATCTCCGTGGACTGGAAGCAGTCAACGGGGAATGGGTTCTCGTGTGCCTTTGCCACAACCTCTTGAAGCTCTACGCGT
TCAGGCAGGCCGGATAG

Upstream 100 bases:

>100_bases
CAAACTGTACACCACATGTCCCGGGCATGACAGAGACCGCCACCCCATGAGGCTAGGAGCCTGTCTGAGTAAGCCAGTTC
TGTAGGAGCAAAAGGGTTGG

Downstream 100 bases:

>100_bases
ACCCGAAATCTGCCTTCAGACAGCGCATGAAGAAGTAGGCACGATCGTTGATATCCAATCATTGGGAGTCTGCCCCTATC
TCACGTGCGGTTACCCGGAC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISPsy6 Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; ISCps6 Transposase; ISKpn6-Like Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein; Transglycosylase Domain-Containing Protein; ISNCY Family Transposase; ISPpu20 Transposase

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSNVFIMSKKTYRPYQPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPYHPRMMVKVLLYAYC
NGVYSSRKIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKH
KAMSYSRMVEEEQRLKAEIAELLQKAEEADQAEDDRFGPHRRGDELPEELRFREQRLAKIQEAKAALEGEARLRAGVDEH
EPPEGPEPKGSKGGRRRKQRKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIIVAAAVTNQAADAPHLI
PMMEQVEANVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRH
AERYRKREQSVEPVFGQIKEARGFRQFHLRGLEAVNGEWVLVCLCHNLLKLYAFRQAG

Sequences:

>Translated_458_residues
MSNVFIMSKKTYRPYQPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPYHPRMMVKVLLYAYC
NGVYSSRKIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKH
KAMSYSRMVEEEQRLKAEIAELLQKAEEADQAEDDRFGPHRRGDELPEELRFREQRLAKIQEAKAALEGEARLRAGVDEH
EPPEGPEPKGSKGGRRRKQRKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIIVAAAVTNQAADAPHLI
PMMEQVEANVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRH
AERYRKREQSVEPVFGQIKEARGFRQFHLRGLEAVNGEWVLVCLCHNLLKLYAFRQAG
>Mature_457_residues
SNVFIMSKKTYRPYQPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPYHPRMMVKVLLYAYCN
GVYSSRKIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKHK
AMSYSRMVEEEQRLKAEIAELLQKAEEADQAEDDRFGPHRRGDELPEELRFREQRLAKIQEAKAALEGEARLRAGVDEHE
PPEGPEPKGSKGGRRRKQRKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIIVAAAVTNQAADAPHLIP
MMEQVEANVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHA
ERYRKREQSVEPVFGQIKEARGFRQFHLRGLEAVNGEWVLVCLCHNLLKLYAFRQAG

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52834; Mature: 52703

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVFIMSKKTYRPYQPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYEREL
CCCEEEEECCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGYPPYHPRMMVKVLLYAYCNGVYSSRKIERRLQEDVAFRVLAANNQPDFRTISDFRKRH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHH
LKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKHKAMSYSRMVEEEQRLKAEIA
HHHHHHHHHHHHHHHHHCCCEEECCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ELLQKAEEADQAEDDRFGPHRRGDELPEELRFREQRLAKIQEAKAALEGEARLRAGVDEH
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
EPPEGPEPKGSKGGRRRKQRKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDAD
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCEEEECC
TQIIVAAAVTNQAADAPHLIPMMEQVEANVDEMPEEVSADAGYFSEQNVQWLLQRRINPY
CEEEEEEEHHCCCCCCCHHHHHHHHHHCCHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCC
IPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHAERYRKREQSVEPVFGQIKE
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARGFRQFHLRGLEAVNGEWVLVCLCHNLLKLYAFRQAG
HCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNVFIMSKKTYRPYQPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYEREL
CCEEEEECCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH
RGYPPYHPRMMVKVLLYAYCNGVYSSRKIERRLQEDVAFRVLAANNQPDFRTISDFRKRH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHH
LKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKHKAMSYSRMVEEEQRLKAEIA
HHHHHHHHHHHHHHHHHCCCEEECCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
ELLQKAEEADQAEDDRFGPHRRGDELPEELRFREQRLAKIQEAKAALEGEARLRAGVDEH
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
EPPEGPEPKGSKGGRRRKQRKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDAD
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHCCCCCCEEEECC
TQIIVAAAVTNQAADAPHLIPMMEQVEANVDEMPEEVSADAGYFSEQNVQWLLQRRINPY
CEEEEEEEHHCCCCCCCHHHHHHHHHHCCHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCC
IPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHAERYRKREQSVEPVFGQIKE
CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ARGFRQFHLRGLEAVNGEWVLVCLCHNLLKLYAFRQAG
HCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA