Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893131

Identifier: 51893131

GI number: 51893131

Start: 2134886

End: 2135185

Strand: Reverse

Name: 51893131

Synonym: STH1993

Alternate gene names: NA

Gene position: 2135185-2134886 (Counterclockwise)

Preceding gene: 51893132

Following gene: 51893130

Centisome position: 59.87

GC content: 60.0

Gene sequence:

>300_bases
ATGAGCCACGATCACGAGCATGAGCACGATGACGAGATCATCGTTCTGACGGACGAGGAAGGCAACGAGCACGAGTTTTC
CATTGTTCAGGTGATCACCGTCGACGGCAAGGACTACGCCATCCTGCTGCCCATCGAGGAAGGCGAGGAGGCGGAGGAGG
CCGTCATCATGCGCATCGACGAGGAGGACGGCGAGGACGTCCTGGTCGAGATCGAGTCCGAGGAGGAGTTCGACCGGGTC
GCCGATGCGTGGGAAGAGATGCTGGACGACGAGGAGTTCGAAGAGGAGTCCGAGAAGTAG

Upstream 100 bases:

>100_bases
ATCTGGACGCCCGGGCCGCCCGTCCGCCCGAAAGTTTCGTTTGACAGGGTAACCGGGCTGCATTAGAATGAGGAATATCT
TGGGGATCGGAGTGATTGCC

Downstream 100 bases:

>100_bases
CCGCCAACGAGCCCTCCGAACAGGAGGGCTCTTTCTTATGGCGAATAGTGAAGAGACGCAGGCTATCTCTGGAGGGATGA
ACGCGCTTGTCGAACGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSHDHEHEHDDEIIVLTDEEGNEHEFSIVQVITVDGKDYAILLPIEEGEEAEEAVIMRIDEEDGEDVLVEIESEEEFDRV
ADAWEEMLDDEEFEEESEK

Sequences:

>Translated_99_residues
MSHDHEHEHDDEIIVLTDEEGNEHEFSIVQVITVDGKDYAILLPIEEGEEAEEAVIMRIDEEDGEDVLVEIESEEEFDRV
ADAWEEMLDDEEFEEESEK
>Mature_98_residues
SHDHEHEHDDEIIVLTDEEGNEHEFSIVQVITVDGKDYAILLPIEEGEEAEEAVIMRIDEEDGEDVLVEIESEEEFDRVA
DAWEEMLDDEEFEEESEK

Specific function: Unknown

COG id: COG3906

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0473 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009711 [H]

Pfam domain/function: PF06949 DUF1292 [H]

EC number: NA

Molecular weight: Translated: 11548; Mature: 11417

Theoretical pI: Translated: 3.50; Mature: 3.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDHEHEHDDEIIVLTDEEGNEHEFSIVQVITVDGKDYAILLPIEEGEEAEEAVIMRID
CCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEC
EEDGEDVLVEIESEEEFDRVADAWEEMLDDEEFEEESEK
CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCC
>Mature Secondary Structure 
SHDHEHEHDDEIIVLTDEEGNEHEFSIVQVITVDGKDYAILLPIEEGEEAEEAVIMRID
CCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEC
EEDGEDVLVEIESEEEFDRVADAWEEMLDDEEFEEESEK
CCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA