| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is cobU [H]
Identifier: 51893066
GI number: 51893066
Start: 2071014
End: 2071565
Strand: Reverse
Name: cobU [H]
Synonym: STH1928
Alternate gene names: 51893066
Gene position: 2071565-2071014 (Counterclockwise)
Preceding gene: 51893067
Following gene: 51893065
Centisome position: 58.09
GC content: 73.37
Gene sequence:
>552_bases ATGGCGGGTGTGATTCTGGTGCTAGGCGGCGCGCGGAGCGGCAAGAGCCGCTGGGCGGAGCATTTGGCTTCGCCGTTCCG GCGGGTGGTCTATCTGGCCACCGGCCGGGCGGGCGATGCGGAGATGGCCGACCGCATCGCCCGGCACCGGGCGAGCCGTC CGGCCCACTGGCGCACGGTGGAGGAAGAGCTCAGGCCGGCGGCCGCCCTGGCGCAGGCCCTGCACGAGGCGCCGGCGGAT GCGGTGCTGCTGGACTGCGTGACCCTGCTCATCTCCAACCACCTGCTGCAGGGGGAGGAGGGGTTCGAAGCCCGGGCCCG GCAGGAGCTGGCGCAGCTGCTCAGCCTGACCCGTGAGCGCGGCGCGCTGCTCATCGCCGTGTCCAACGAGGTCGGGGCGG GGCTGGTGCCCGAGCACCGGCTCGGGCGGCTCTTCCGCGACGCCCAGGGGCGGCTGAATCAGTGGCTGGCGCGGGAGGCG GACCAGGTCTACGCCTGCGTGGCCGGTATCGCCGTCGACCTGAGGCGGATCGGTACGGTGATCCCGGAGTGA
Upstream 100 bases:
>100_bases TTCAGGGGCTCCAGTGGTTCGCCCGGAATCTCCACCCGGAGCTCTTCGAGCAGTGACCGGGCCGATGGGGCGCTTTCCCG AAGGGAGCGAGGCGATGCGC
Downstream 100 bases:
>100_bases GCGTGGCGGAAATGTTTCCCGCGGCGCCCTGGTACCTGCCGCTGGCGGCCCTCGCGGTGGACGCGGCGGTGGGCGATCCC GCCCGGCTGCCCCATCCGGT
Product: cobinamide kinase and guanylyltransferase
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MAGVILVLGGARSGKSRWAEHLASPFRRVVYLATGRAGDAEMADRIARHRASRPAHWRTVEEELRPAAALAQALHEAPAD AVLLDCVTLLISNHLLQGEEGFEARARQELAQLLSLTRERGALLIAVSNEVGAGLVPEHRLGRLFRDAQGRLNQWLAREA DQVYACVAGIAVDLRRIGTVIPE
Sequences:
>Translated_183_residues MAGVILVLGGARSGKSRWAEHLASPFRRVVYLATGRAGDAEMADRIARHRASRPAHWRTVEEELRPAAALAQALHEAPAD AVLLDCVTLLISNHLLQGEEGFEARARQELAQLLSLTRERGALLIAVSNEVGAGLVPEHRLGRLFRDAQGRLNQWLAREA DQVYACVAGIAVDLRRIGTVIPE >Mature_182_residues AGVILVLGGARSGKSRWAEHLASPFRRVVYLATGRAGDAEMADRIARHRASRPAHWRTVEEELRPAAALAQALHEAPADA VLLDCVTLLISNHLLQGEEGFEARARQELAQLLSLTRERGALLIAVSNEVGAGLVPEHRLGRLFRDAQGRLNQWLAREAD QVYACVAGIAVDLRRIGTVIPE
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=184, Percent_Identity=41.8478260869565, Blast_Score=127, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 19948; Mature: 19817
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVILVLGGARSGKSRWAEHLASPFRRVVYLATGRAGDAEMADRIARHRASRPAHWRTV CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH EEELRPAAALAQALHEAPADAVLLDCVTLLISNHLLQGEEGFEARARQELAQLLSLTRER HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GALLIAVSNEVGAGLVPEHRLGRLFRDAQGRLNQWLAREADQVYACVAGIAVDLRRIGTV CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPE CCC >Mature Secondary Structure AGVILVLGGARSGKSRWAEHLASPFRRVVYLATGRAGDAEMADRIARHRASRPAHWRTV CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH EEELRPAAALAQALHEAPADAVLLDCVTLLISNHLLQGEEGFEARARQELAQLLSLTRER HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC GALLIAVSNEVGAGLVPEHRLGRLFRDAQGRLNQWLAREADQVYACVAGIAVDLRRIGTV CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IPE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609; 9601028; 10529169 [H]